Factsheet for Bra021214.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 1
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52729	Canola	cytosol	100.0	100.0
CDY34988	Canola	cytosol	99.39	99.39
Bra001649.1-P	Field mustard	cytosol	94.48	94.48
Bra022190.1-P	Field mustard	cytosol	94.48	94.48
Bra038472.1-P	Field mustard	cytosol	42.94	92.11
AT3G17020.1	Thale cress	cytosol	87.73	87.73
VIT_05s0077g01070.t01	Wine grape	cytosol	71.17	70.3
Solyc01g059930.2.1	Tomato	cytosol, extracellular	66.26	66.26
PGSC0003DMT400056226	Potato	cytosol, extracellular	66.26	66.26
GSMUA_Achr11P...	Banana	cytosol	63.8	64.2
KRH11952	Soybean	cytosol	63.8	63.41
TraesCS1D01G108300.1	Wheat	peroxisome	58.28	57.23
TraesCS1A01G106600.1	Wheat	peroxisome	57.67	56.63
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	57.67	56.29
Zm00001d037573_P001	Maize	cytosol	53.99	52.69
EES19072	Sorghum	cytosol	53.99	52.69
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	44.17	49.66
GSMUA_Achr8P06380_001	Banana	cytosol	19.02	47.69
Bra032002.1-P	Field mustard	cytosol	44.17	45.28
Bra007038.1-P	Field mustard	cytosol	42.33	43.67
HORVU1Hr1G023260.1	Barley	plastid	57.67	42.73
TraesCS1B01G124100.1	Wheat	cytosol	51.53	42.64
Bra003163.1-P	Field mustard	cytosol	41.1	42.14
Bra014852.1-P	Field mustard	cytosol	41.72	41.98
Zm00001d011125_P001	Maize	extracellular	52.76	34.96

Protein Annotations

EnsemblPlants:Bra021214.1	EnsemblPlants:Bra021214.1-P	EnsemblPlantsGene:Bra021214	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65
PFAM:PF00582	PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	UniParc:UPI00025439D2	UniProt:M4DXG8
MapMan:35.2	:	:	:	:	:

Description

AT3G17020 (E=1e-072) | universal stress protein (USP) family protein

Coordinates

chrA01:+:23325616..23326603

Molecular Weight (calculated)

17874.6 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.032

Length

163 amino acids

Sequence
(BLAST)

001: MAESNGRRIG VAVDFSECSK KALNWAIENV VRDGDYLILI TVAHDMHYED GEMQLWETVG SPLIPLSEFS EAAVMKKYGV KPDAETLDIA NTAARQKSIT
101: VVMKIYWGDP REKICEAAEH IPLSSLVIGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHH

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.