CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11952	Soybean	cytosol	69.66	61.59
VIT_05s0077g01070.t01	Wine grape	cytosol	52.41	46.06
CDX82383	Canola	cytosol	51.03	45.4
Solyc01g059930.2.1	Tomato	cytosol, extracellular	50.34	44.79
CDX75899	Canola	cytosol	50.34	44.79
Bra001649.1-P	Field mustard	cytosol	49.66	44.17
AT3G17020.1	Thale cress	cytosol	49.66	44.17
CDY52729	Canola	cytosol	49.66	44.17
Bra021214.1-P	Field mustard	cytosol	49.66	44.17
CDY34988	Canola	cytosol	48.97	43.56
CDX92110	Canola	cytosol	48.97	43.56
Bra022190.1-P	Field mustard	cytosol	48.97	43.56
PGSC0003DMT400056226	Potato	cytosol, extracellular	48.97	43.56
CDY67360	Canola	cytosol	20.0	43.28
CDY44517	Canola	cytosol	19.31	41.79
Bra038472.1-P	Field mustard	cytosol	20.69	39.47
GSMUA_Achr11P...	Banana	cytosol	43.45	38.89
CDX95890	Canola	cytosol	49.66	36.92
CDY69106	Canola	cytosol	19.31	36.84
TraesCS1D01G108300.1	Wheat	peroxisome	40.0	34.94
TraesCS1A01G106600.1	Wheat	peroxisome	40.0	34.94
Zm00001d037573_P001	Maize	cytosol	40.0	34.73
EES19072	Sorghum	cytosol	40.0	34.73
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	39.31	34.13
KRH24723	Soybean	nucleus	34.48	30.49
KRH29731	Soybean	endoplasmic reticulum	33.79	29.88
KRH17289	Soybean	cytosol	33.1	28.92
KRH00077	Soybean	cytosol	30.34	28.03
KRH49226	Soybean	cytosol	29.66	27.39
HORVU1Hr1G023260.1	Barley	plastid	40.0	26.36
KRH75751	Soybean	endoplasmic reticulum	29.66	26.22
KRH62427	Soybean	endoplasmic reticulum	29.66	25.75
KRH72936	Soybean	cytosol	25.52	25.17
TraesCS1B01G124100.1	Wheat	cytosol	32.41	23.86
Zm00001d011125_P001	Maize	extracellular	39.31	23.17
GSMUA_Achr8P06380_001	Banana	cytosol	6.21	13.85

Protein Annotations

EMBL:ACUP02005404	EnsemblPlants:KRH36979	EnsemblPlantsGene:GLYMA_09G036100	Gene3D:3.40.50.620	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0008150	GO:GO:0009409	GO:GO:0009628	GO:GO:0016020
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	ProteinID:KRH36979	ProteinID:KRH36979.1
SignalP:SignalP-noTM	SUPFAM:SSF52402	UniParc:UPI0006ED8D50	UniProt:A0A0R0I9L8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr9:+:3026084..3028160

Molecular Weight (calculated)

15932.7 Da

IEP (calculated)

7.670

GRAVY (calculated)

0.323

Length

145 amino acids

Sequence
(BLAST)

001: MQNAMVALSL SSSQIAVLVL HLRALLGVAV DFSACSIKAL KLTVDNVVRE GDNLVLIIVR HAHGYEHMQL WETTGSPLIP LAEFSDPVLM KRYELKPAPE
101: VIDIVSTAAT QKKIKMVIME SVSNYVVNNA SCPITVVKNP CHHHH

Best Arabidopsis Sequence Match ( AT3G17020.2 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTSI
101: KIMIPKDGDL PVADSL

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.