Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17289 | Soybean | cytosol | 91.16 | 80.72 |
| CDY50688 | Canola | cytosol | 64.63 | 59.75 |
| Bra032002.1-P | Field mustard | cytosol | 63.95 | 59.12 |
| CDY43136 | Canola | cytosol | 63.95 | 59.12 |
| VIT_04s0079g00610.t01 | Wine grape | cytosol | 64.63 | 57.93 |
| GSMUA_Achr10P... | Banana | cytosol | 57.82 | 52.47 |
| Solyc04g014600.2.1 | Tomato | nucleus | 53.06 | 48.15 |
| PGSC0003DMT400060724 | Potato | cytosol | 52.38 | 47.53 |
| Os02t0773200-01 | Rice | cytosol | 52.38 | 46.67 |
| KRH24723 | Soybean | nucleus | 51.02 | 45.73 |
| KRH75751 | Soybean | endoplasmic reticulum | 50.34 | 45.12 |
| EES05878 | Sorghum | cytosol | 50.34 | 44.85 |
| KRH00077 | Soybean | cytosol | 47.62 | 44.59 |
| KRH29731 | Soybean | endoplasmic reticulum | 49.66 | 44.51 |
| TraesCS6D01G303600.1 | Wheat | cytosol | 49.66 | 44.24 |
| TraesCS6B01G354400.1 | Wheat | golgi | 49.66 | 44.24 |
| TraesCS6A01G323800.1 | Wheat | cytosol, mitochondrion, plastid | 49.66 | 44.24 |
| Zm00001d018229_P001 | Maize | mitochondrion | 48.98 | 43.64 |
| KRH62427 | Soybean | endoplasmic reticulum | 48.98 | 43.11 |
| HORVU6Hr1G079150.1 | Barley | cytosol, mitochondrion, plastid | 48.3 | 43.03 |
| KRH49226 | Soybean | cytosol | 45.58 | 42.68 |
| AT3G03270.1 | Thale cress | cytosol | 56.46 | 41.29 |
| KRH11952 | Soybean | cytosol | 38.78 | 34.76 |
| KRH36979 | Soybean | endoplasmic reticulum, extracellular, vacuole | 25.17 | 25.52 |
Protein Annotations
| EMBL:ACUP02001257 | EnsemblPlants:KRH72936 | EnsemblPlantsGene:GLYMA_02G241600 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF40 |
| PFAM:PF00582 | PRINTS:PR01438 | ProteinID:KRH72936 | ProteinID:KRH72936.1 | SUPFAM:SSF52402 | UniParc:UPI0006EE098A |
| UniProt:A0A0R0L852 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:43010950..43012781
Molecular Weight (calculated)
16188.4 Da
IEP (calculated)
6.670
GRAVY (calculated)
-0.284
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: TNCWAVDNLI NKGDQIILIT VQPPQAHHTR KELFEDTSSP LVPLEELREL NFTKQYEIAG DPEVRDILDT ASMTKGAKAV AKVYWGDPRE KLCNAVEDLH
101: LDFLVVGSRG LGPIKRVLLG SVSNNVMTNA SCPVTVVKGK QSSNSHH
101: LDFLVVGSRG LGPIKRVLLG SVSNNVMTNA SCPVTVVKGK QSSNSHH
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
Arabidopsis Description
AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.