CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032002.1-P	Field mustard	cytosol	100.0	100.0
CDY50688	Canola	cytosol	99.37	99.37
KRH17289	Soybean	cytosol	71.7	68.67
VIT_04s0079g00610.t01	Wine grape	cytosol	68.55	66.46
AT3G03270.1	Thale cress	cytosol	83.02	65.67
Solyc04g014600.2.1	Tomato	nucleus	65.41	64.2
PGSC0003DMT400060724	Potato	cytosol	65.41	64.2
KRH72936	Soybean	cytosol	59.12	63.95
GSMUA_Achr10P...	Banana	cytosol	62.89	61.73
TraesCS6D01G303600.1	Wheat	cytosol	59.75	57.58
TraesCS6B01G354400.1	Wheat	golgi	59.75	57.58
TraesCS6A01G323800.1	Wheat	cytosol, mitochondrion, plastid	59.75	57.58
EES05878	Sorghum	cytosol	59.75	57.58
HORVU6Hr1G079150.1	Barley	cytosol, mitochondrion, plastid	59.12	56.97
Zm00001d018229_P001	Maize	mitochondrion	58.49	56.36
Os02t0773200-01	Rice	cytosol	58.49	56.36
CDY54032	Canola	plastid	11.95	55.88
CDX73512	Canola	cytosol	54.09	54.78
CDY07565	Canola	cytosol	54.72	54.72
CDX67580	Canola	cytosol	54.72	54.72
CDY13163	Canola	cytosol	54.72	53.7
CDX76180	Canola	cytosol	54.72	53.7
CDY52729	Canola	cytosol	45.28	44.17
CDY34988	Canola	cytosol	45.28	44.17
CDX92110	Canola	cytosol	45.28	44.17
CDX82383	Canola	cytosol	44.65	43.56
CDX75899	Canola	cytosol	44.65	43.56
CDY69106	Canola	cytosol	20.75	43.42
CDY67360	Canola	cytosol	16.35	38.81
CDY44517	Canola	cytosol	15.72	37.31
CDX95890	Canola	cytosol	45.28	36.92
CDY54033	Canola	cytosol	21.38	35.05

Protein Annotations

EnsemblPlants:CDY43136	EnsemblPlantsGene:GSBRNA2T00076108001	Gene3D:3.40.50.620	GO:A0A078HZY9	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF40
PFAM:PF00582	PRINTS:PR01438	ProteinID:CDY43136	ProteinID:CDY43136.1	SEG:seg	SUPFAM:SSF52402
UniParc:UPI000254616B	UniProt:A0A078HZY9	MapMan:35.2	:	:	:

Description

BnaA05g32500DBnaA05g32500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZY9]

Coordinates

chrLK032546:+:64067..65200

Molecular Weight (calculated)

17561.3 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.126

Length

159 amino acids

Sequence
(BLAST)

001: MVKARTVGVG MDYSPTSKSA LRWTAENLLD DGDTIILIHV QPQNAEHTRK ILFEETGSPL IPLEEFREVN FSKQYGLAYD PEVLNVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GPLKRMLLGS VSNHVVTNAT CPVTVVKAN

Best Arabidopsis Sequence Match ( AT3G03270.2 )
(BLAST)

001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN

Arabidopsis Description

AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.