CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44517	Canola	cytosol	95.52	95.52
Bra038472.1-P	Field mustard	cytosol	97.01	85.53
CDY69106	Canola	cytosol	94.03	82.89
CDX92110	Canola	cytosol	91.04	37.42
CDY52729	Canola	cytosol	89.55	36.81
CDY34988	Canola	cytosol	89.55	36.81
CDX75899	Canola	cytosol	88.06	36.2
CDX82383	Canola	cytosol	88.06	36.2
AT3G17020.1	Thale cress	cytosol	82.09	33.74
CDX95890	Canola	cytosol	85.07	29.23
VIT_05s0077g01070.t01	Wine grape	cytosol	70.15	28.48
GSMUA_Achr11P...	Banana	cytosol	64.18	26.54
KRH11952	Soybean	cytosol	64.18	26.22
GSMUA_Achr8P06380_001	Banana	cytosol	25.37	26.15
PGSC0003DMT400056226	Potato	cytosol, extracellular	59.7	24.54
Solyc01g059930.2.1	Tomato	cytosol, extracellular	59.7	24.54
TraesCS1A01G106600.1	Wheat	peroxisome	53.73	21.69
TraesCS1D01G108300.1	Wheat	peroxisome	53.73	21.69
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	53.73	21.56
Zm00001d037573_P001	Maize	cytosol	52.24	20.96
EES19072	Sorghum	cytosol	52.24	20.96
CDY54032	Canola	plastid	10.45	20.59
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	43.28	20.0
CDY50688	Canola	cytosol	40.3	16.98
CDY43136	Canola	cytosol	38.81	16.35
HORVU1Hr1G023260.1	Barley	plastid	52.24	15.91
CDX73512	Canola	cytosol	34.33	14.65
CDY13163	Canola	cytosol	34.33	14.2
CDX76180	Canola	cytosol	34.33	14.2
Zm00001d011125_P001	Maize	extracellular	50.75	13.82
CDY07565	Canola	cytosol	31.34	13.21
CDX67580	Canola	cytosol	31.34	13.21
TraesCS1B01G124100.1	Wheat	cytosol	38.81	13.2
CDY54033	Canola	cytosol	7.46	5.15

Protein Annotations

EnsemblPlants:CDY67360	EnsemblPlantsGene:GSBRNA2T00062811001	Gene3D:3.40.50.620	GO:A0A078JLR8	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	PFAM:PF00582
ProteinID:CDY67360	ProteinID:CDY67360.1	SEG:seg	SUPFAM:SSF52402	UniParc:UPI0004EEB545	UniProt:A0A078JLR8
MapMan:35.2	:	:	:	:	:

Description

BnaAnng24100DBnaAnng24100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLR8]

Coordinates

chrLK036020:-:8572..9111

Molecular Weight (calculated)

7213.8 Da

IEP (calculated)

8.258

GRAVY (calculated)

-0.072

Length

67 amino acids

Sequence
(BLAST)

1: MKKYGLKPDA ETLDIANTTA RQKSICEAVD HIPLSSLGGL ERMIMGSVSN HVVNNVACPV TVVKSHH

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.