Factsheet for VIT_05s0077g01070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g059930.2.1	Tomato	cytosol, extracellular	72.12	73.01
PGSC0003DMT400056226	Potato	cytosol, extracellular	72.12	73.01
GSMUA_Achr11P...	Banana	cytosol	71.52	72.84
Bra022190.1-P	Field mustard	cytosol	70.91	71.78
CDX92110	Canola	cytosol	70.91	71.78
Bra021214.1-P	Field mustard	cytosol	70.3	71.17
CDX75899	Canola	cytosol	70.3	71.17
CDY52729	Canola	cytosol	70.3	71.17
Bra038472.1-P	Field mustard	cytosol	32.73	71.05
Bra001649.1-P	Field mustard	cytosol	69.7	70.55
CDY34988	Canola	cytosol	69.7	70.55
CDX82383	Canola	cytosol	69.7	70.55
CDY67360	Canola	cytosol	28.48	70.15
AT3G17020.1	Thale cress	cytosol	67.88	68.71
CDY69106	Canola	cytosol	31.52	68.42
CDY44517	Canola	cytosol	27.27	67.16
KRH11952	Soybean	cytosol	64.24	64.63
Zm00001d037573_P001	Maize	cytosol	61.82	61.08
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	61.82	61.08
EES19072	Sorghum	cytosol	60.61	59.88
CDX95890	Canola	cytosol	69.09	58.46
TraesCS1D01G108300.1	Wheat	peroxisome	57.58	57.23
TraesCS1A01G106600.1	Wheat	peroxisome	56.97	56.63
GSMUA_Achr8P06380_001	Banana	cytosol	21.82	55.38
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	46.06	52.41
VIT_04s0079g00610.t01	Wine grape	cytosol	46.06	46.34
VIT_08s0007g01430.t01	Wine grape	cytosol	44.85	45.12
HORVU1Hr1G023260.1	Barley	plastid	58.18	43.64
TraesCS1B01G124100.1	Wheat	cytosol	51.52	43.15
VIT_06s0004g05730.t01	Wine grape	cytosol	41.82	42.07
Zm00001d011125_P001	Maize	extracellular	60.0	40.24

Protein Annotations

EntrezGene:100255026	wikigene:100255026	Gene3D:3.40.50.620	MapMan:35.2	ProteinID:CCB47974	ProteinID:CCB47974.1
UniProt:F6H727	EMBL:FN595246	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729	EntrezGene:LOC100255026
wikigene:LOC100255026	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	TIGR:TC52929	TIGR:TC53521	UniParc:UPI00015CBD6B	InterPro:Universal_stress_UspA	InterPro:UspA
ArrayExpress:VIT_05s0077g01070	EnsemblPlantsGene:VIT_05s0077g01070	EnsemblPlants:VIT_05s0077g01070.t01	unigene:Vvi.2569	RefSeq:XP_002277653	RefSeq:XP_002277653.1

Description

No Description!

Coordinates

chr5:+:833152..835199

Molecular Weight (calculated)

18056.9 Da

IEP (calculated)

5.814

GRAVY (calculated)

-0.018

Length

165 amino acids

Sequence
(BLAST)

001: MEVNRRVGVA VDFSACSKKA LKWALDNVVR DGDHLIILSV LPEGHYEEGE MQLWETTGSP LIPLSEFSDP IISKKYGVKP DAETLDIVNC VARQKDIVVV
101: MKVYWGDARE KICEAIDNIP LSCLVIGNRG LGKIKRAILG SVSNYVVNNG SCPVTVVKNA EESGK

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.