Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69106 | Canola | cytosol | 97.37 | 97.37 |
| CDY67360 | Canola | cytosol | 85.53 | 97.01 |
| CDY44517 | Canola | cytosol | 84.21 | 95.52 |
| Bra022190.1-P | Field mustard | cytosol | 93.42 | 43.56 |
| Bra021214.1-P | Field mustard | cytosol | 92.11 | 42.94 |
| Bra001649.1-P | Field mustard | cytosol | 89.47 | 41.72 |
| AT3G17020.1 | Thale cress | cytosol | 85.53 | 39.88 |
| VIT_05s0077g01070.t01 | Wine grape | cytosol | 71.05 | 32.73 |
| GSMUA_Achr11P... | Banana | cytosol | 67.11 | 31.48 |
| KRH11952 | Soybean | cytosol | 67.11 | 31.1 |
| GSMUA_Achr8P06380_001 | Banana | cytosol | 26.32 | 30.77 |
| PGSC0003DMT400056226 | Potato | cytosol, extracellular | 63.16 | 29.45 |
| Solyc01g059930.2.1 | Tomato | cytosol, extracellular | 63.16 | 29.45 |
| Os05t0157200-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 56.58 | 25.75 |
| TraesCS1A01G106600.1 | Wheat | peroxisome | 55.26 | 25.3 |
| TraesCS1D01G108300.1 | Wheat | peroxisome | 55.26 | 25.3 |
| EES19072 | Sorghum | cytosol | 53.95 | 24.55 |
| Zm00001d037573_P001 | Maize | cytosol | 53.95 | 24.55 |
| Bra032002.1-P | Field mustard | cytosol | 44.74 | 21.38 |
| KRH36979 | Soybean | endoplasmic reticulum, extracellular, vacuole | 39.47 | 20.69 |
| Bra007038.1-P | Field mustard | cytosol | 40.79 | 19.62 |
| HORVU1Hr1G023260.1 | Barley | plastid | 53.95 | 18.64 |
| Bra014852.1-P | Field mustard | cytosol | 38.16 | 17.9 |
| Bra003163.1-P | Field mustard | cytosol | 36.84 | 17.61 |
| Zm00001d011125_P001 | Maize | extracellular | 52.63 | 16.26 |
| TraesCS1B01G124100.1 | Wheat | cytosol | 42.11 | 16.24 |
Protein Annotations
| EnsemblPlants:Bra038472.1 | EnsemblPlants:Bra038472.1-P | EnsemblPlantsGene:Bra038472 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF65 | PFAM:PF00582 |
| SEG:seg | SUPFAM:SSF52402 | UniParc:UPI000254450D | UniProt:M4FBK6 | MapMan:35.2 | : |
Description
AT3G17020 (E=4e-021) | universal stress protein (USP) family protein
Coordinates
chrA01:-:10987944..10988498
Molecular Weight (calculated)
8329.1 Da
IEP (calculated)
8.248
GRAVY (calculated)
-0.229
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKYGLKPDA ETLDIANTAA RQKSIYWGDP REKICEAVDH IPLSSLGGLE RMIMGSVSNH VVNNVACPVT VVKSHH
001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
Arabidopsis Description
AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.