CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67360	Canola	cytosol	95.52	95.52
CDY69106	Canola	cytosol	98.51	86.84
Bra038472.1-P	Field mustard	cytosol	95.52	84.21
CDX92110	Canola	cytosol	89.55	36.81
CDY52729	Canola	cytosol	88.06	36.2
CDY34988	Canola	cytosol	88.06	36.2
CDX75899	Canola	cytosol	86.57	35.58
CDX82383	Canola	cytosol	86.57	35.58
AT3G17020.1	Thale cress	cytosol	80.6	33.13
CDX95890	Canola	cytosol	83.58	28.72
VIT_05s0077g01070.t01	Wine grape	cytosol	67.16	27.27
GSMUA_Achr8P06380_001	Banana	cytosol	25.37	26.15
GSMUA_Achr11P...	Banana	cytosol	62.69	25.93
KRH11952	Soybean	cytosol	62.69	25.61
Solyc01g059930.2.1	Tomato	cytosol, extracellular	58.21	23.93
PGSC0003DMT400056226	Potato	cytosol, extracellular	58.21	23.93
TraesCS1D01G108300.1	Wheat	peroxisome	52.24	21.08
TraesCS1A01G106600.1	Wheat	peroxisome	52.24	21.08
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	52.24	20.96
Zm00001d037573_P001	Maize	cytosol	49.25	19.76
EES19072	Sorghum	cytosol	49.25	19.76
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	41.79	19.31
CDY54032	Canola	plastid	8.96	17.65
CDY50688	Canola	cytosol	38.81	16.35
CDY43136	Canola	cytosol	37.31	15.72
HORVU1Hr1G023260.1	Barley	plastid	50.75	15.45
CDX73512	Canola	cytosol	32.84	14.01
CDX76180	Canola	cytosol	32.84	13.58
CDY13163	Canola	cytosol	32.84	13.58
TraesCS1B01G124100.1	Wheat	cytosol	38.81	13.2
Zm00001d011125_P001	Maize	extracellular	47.76	13.01
CDX67580	Canola	cytosol	29.85	12.58
CDY07565	Canola	cytosol	29.85	12.58
CDY54033	Canola	cytosol	7.46	5.15

Protein Annotations

EnsemblPlants:CDY44517	EnsemblPlantsGene:GSBRNA2T00080290001	Gene3D:3.40.50.620	GO:A0A078I3D4	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	PFAM:PF00582
ProteinID:CDY44517	ProteinID:CDY44517.1	SUPFAM:SSF52402	UniParc:UPI0004EDC221	UniProt:A0A078I3D4	MapMan:35.2

Description

BnaC01g10320DBnaC01g10320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3D4]

Coordinates

chrLK032592:+:232070..232620

Molecular Weight (calculated)

7211.8 Da

IEP (calculated)

8.258

GRAVY (calculated)

-0.025

Length

67 amino acids

Sequence
(BLAST)

1: MKKYGLKPDA ETLDIANTAA RQKSICEAVD HIPLSSLGGL ERMIMGSVSN HIVNNVACPV TIVKSHH

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.