Factsheet for Zm00001d037573_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19072	Sorghum	cytosol	98.2	98.2
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	78.44	78.44
TraesCS1D01G108300.1	Wheat	peroxisome	77.25	77.71
TraesCS1A01G106600.1	Wheat	peroxisome	76.65	77.11
Zm00001d011125_P001	Maize	extracellular	94.01	63.82
GSMUA_Achr11P...	Banana	cytosol	61.08	62.96
VIT_05s0077g01070.t01	Wine grape	cytosol	61.08	61.82
HORVU1Hr1G023260.1	Barley	plastid	78.44	59.55
Solyc01g059930.2.1	Tomato	cytosol, extracellular	55.09	56.44
PGSC0003DMT400056226	Potato	cytosol, extracellular	54.49	55.83
TraesCS1B01G124100.1	Wheat	cytosol	65.27	55.33
CDX92110	Canola	cytosol	52.69	53.99
CDY34988	Canola	cytosol	52.69	53.99
CDY52729	Canola	cytosol	52.69	53.99
Bra022190.1-P	Field mustard	cytosol	52.69	53.99
Bra021214.1-P	Field mustard	cytosol	52.69	53.99
Bra038472.1-P	Field mustard	cytosol	24.55	53.95
CDX75899	Canola	cytosol	52.1	53.37
Bra001649.1-P	Field mustard	cytosol	51.5	52.76
CDX82383	Canola	cytosol	51.5	52.76
CDY69106	Canola	cytosol	23.95	52.63
CDY67360	Canola	cytosol	20.96	52.24
AT3G17020.1	Thale cress	cytosol	50.3	51.53
KRH11952	Soybean	cytosol	49.7	50.61
Zm00001d008721_P001	Maize	mitochondrion	47.31	50.0
CDY44517	Canola	cytosol	19.76	49.25
Zm00001d018229_P001	Maize	mitochondrion	47.31	47.88
GSMUA_Achr8P06380_001	Banana	cytosol	18.56	47.69
CDX95890	Canola	cytosol	53.29	45.64
Zm00001d012382_P002	Maize	cytosol	47.31	41.36
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	34.73	40.0
Zm00001d038351_P004	Maize	cytosol	43.11	30.13
Zm00001d008720_P002	Maize	mitochondrion	16.17	10.47

Protein Annotations

EnsemblPlants:Zm00001d037573_P001	EnsemblPlants:Zm00001d037573_T001	EnsemblPlantsGene:Zm00001d037573	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65
PFAM:PF00582	PRINTS:PR01438	ProteinID:AQK84373.1	ProteinID:AQK84374.1	SEG:seg	SUPFAM:SSF52402
UniParc:UPI000221BFBE	UniProt:A0A1D6LZ57	MapMan:35.2	:	:	:

Description

USP family protein

Coordinates

chr6:+:130066372..130069036

Molecular Weight (calculated)

18038.7 Da

IEP (calculated)

5.255

GRAVY (calculated)

0.063

Length

167 amino acids

Sequence
(BLAST)

001: MAGAEGERWV GLATDFSEGS RAALRWAAAN LLRAGDHLLL LHVIKEPDYE QSEAILWEST GSPLIPLSEF SDPIIAKKYG AKPDIETLDI LNTTATQKDI
101: VVVVKVLWGD PREKLCQVIH DTPLSCLVIG SRGLGKLKRV LLGSVSDYVV NNATCPVTVV KSTSTEG

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.