Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012382_P002 | |
| Zm00001d038351_P004 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G53990.1 | Zm00001d012382_P002 | AT3G53990.1 | 21798944 |
| AT3G53990.1 | Zm00001d038351_P004 | AT3G53990.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18332 | Sorghum | cytosol | 56.49 | 81.33 |
| TraesCS1D01G279800.1 | Wheat | cytosol, golgi, unclear | 45.61 | 65.66 |
| TraesCS1B01G289700.1 | Wheat | cytosol | 45.61 | 65.66 |
| TraesCS1A01G280700.1 | Wheat | cytosol | 45.61 | 65.66 |
| Os05t0453700-01 | Rice | cytosol | 46.44 | 58.73 |
| KRH29731 | Soybean | endoplasmic reticulum | 38.91 | 56.71 |
| KRH24723 | Soybean | nucleus | 38.49 | 56.1 |
| GSMUA_Achr6P23610_001 | Banana | cytosol | 35.98 | 53.75 |
| KRH49226 | Soybean | cytosol | 35.15 | 53.5 |
| KRH00077 | Soybean | cytosol | 34.73 | 52.87 |
| PGSC0003DMT400030606 | Potato | cytosol | 36.4 | 52.73 |
| VIT_08s0007g01430.t01 | Wine grape | cytosol | 35.98 | 52.44 |
| CDX73512 | Canola | cytosol | 34.31 | 52.23 |
| Bra007038.1-P | Field mustard | cytosol | 34.31 | 51.9 |
| AT3G53990.1 | Thale cress | cytosol | 34.73 | 51.88 |
| Zm00001d012382_P002 | Maize | cytosol | 41.42 | 51.83 |
| Solyc09g011670.2.1 | Tomato | cytosol, nucleus | 35.56 | 51.83 |
| KRH75751 | Soybean | endoplasmic reticulum | 35.56 | 51.83 |
| KRH62427 | Soybean | endoplasmic reticulum | 35.98 | 51.5 |
| Solyc09g011660.2.1 | Tomato | cytosol | 35.15 | 51.22 |
| Bra003163.1-P | Field mustard | cytosol | 33.47 | 50.31 |
| CDY07565 | Canola | cytosol | 33.47 | 50.31 |
| CDX67580 | Canola | cytosol | 33.47 | 50.31 |
| Bra014852.1-P | Field mustard | cytosol | 33.47 | 49.38 |
| CDY13163 | Canola | cytosol | 33.47 | 49.38 |
| CDX76180 | Canola | cytosol | 33.47 | 49.38 |
| VIT_06s0004g05730.t01 | Wine grape | cytosol | 32.64 | 47.56 |
| Solyc10g086670.1.1 | Tomato | cytosol | 32.64 | 46.99 |
| Zm00001d018229_P001 | Maize | mitochondrion | 31.8 | 46.06 |
| GSMUA_Achr3P17670_001 | Banana | mitochondrion | 35.56 | 45.95 |
| PGSC0003DMT400049227 | Potato | cytosol | 31.38 | 45.18 |
| PGSC0003DMT400030609 | Potato | cytosol | 11.3 | 43.55 |
| Zm00001d037573_P001 | Maize | cytosol | 30.13 | 43.11 |
| CDY54033 | Canola | cytosol | 15.06 | 37.11 |
| Zm00001d008721_P001 | Maize | mitochondrion | 23.85 | 36.08 |
| CDY54032 | Canola | plastid | 5.02 | 35.29 |
| Zm00001d011125_P001 | Maize | extracellular | 29.71 | 28.86 |
| Zm00001d008720_P002 | Maize | mitochondrion | 11.3 | 10.47 |
Protein Annotations
| EnsemblPlants:Zm00001d038351_P004 | EnsemblPlants:Zm00001d038351_T004 | EnsemblPlantsGene:Zm00001d038351 | EntrezGene:100274324 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0016787 | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF23 |
| PFAM:PF00582 | ProteinID:AQK86386.1 | SEG:seg | SUPFAM:SSF52402 | UniParc:UPI0008435448 | UniProt:A0A1D6M5M2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Adenine nucleotide alpha hydrolases-like superfamily protein
Coordinates
chr6:+:155009232..155011475
Molecular Weight (calculated)
26000.3 Da
IEP (calculated)
7.942
GRAVY (calculated)
-0.261
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAARADGER RIGVAIDYSE SAKKALDWAI DNLLHHGDTL VVVHVLHHGA EETKHTLWAK SGSRKLPPLK LSPHPSLPYP YPNAHPLPAA LIPLSEFREP
101: EVMQGYGVRP DAEVLDAIDT AARQKQLKVV AKLYWGDARE KLCDAVEDLR IDSLVMGSRG LGPIQRTGMR CSASDIAVMS HAMLPCELGP FSNSQGGIVF
201: SLSKSCEDSP GKRDKLRAVK RIVPGDSRQG EVVAWAACQ
101: EVMQGYGVRP DAEVLDAIDT AARQKQLKVV AKLYWGDARE KLCDAVEDLR IDSLVMGSRG LGPIQRTGMR CSASDIAVMS HAMLPCELGP FSNSQGGIVF
201: SLSKSCEDSP GKRDKLRAVK RIVPGDSRQG EVVAWAACQ
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRPNHNG FMIIMFDHSL VGLVSLDHDQ SGLINMAEMG SSKSICWIRR NQERDSRWSF SDLLLDDHPL
201: D
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRPNHNG FMIIMFDHSL VGLVSLDHDQ SGLINMAEMG SSKSICWIRR NQERDSRWSF SDLLLDDHPL
201: D
Arabidopsis Description
AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.