Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012382_P002 | |
| Zm00001d038351_P004 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G53990.1 | Zm00001d012382_P002 | AT3G53990.1 | 21798944 |
| AT3G53990.1 | Zm00001d038351_P004 | AT3G53990.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03887 | Sorghum | cytosol | 69.11 | 83.54 |
| Os01t0849600-01 | Rice | cytosol, plastid | 67.02 | 79.01 |
| CDY54032 | Canola | plastid | 10.99 | 61.76 |
| KRH29731 | Soybean | endoplasmic reticulum | 48.17 | 56.1 |
| GSMUA_Achr6P23610_001 | Banana | cytosol | 46.07 | 55.0 |
| KRH24723 | Soybean | nucleus | 47.12 | 54.88 |
| Solyc09g011660.2.1 | Tomato | cytosol | 47.12 | 54.88 |
| PGSC0003DMT400030606 | Potato | cytosol | 47.12 | 54.55 |
| HORVU3Hr1G085660.9 | Barley | cytosol | 54.45 | 53.89 |
| VIT_08s0007g01430.t01 | Wine grape | cytosol | 46.07 | 53.66 |
| Solyc09g011670.2.1 | Tomato | cytosol, nucleus | 46.07 | 53.66 |
| CDX73512 | Canola | cytosol | 43.98 | 53.5 |
| KRH00077 | Soybean | cytosol | 43.98 | 53.5 |
| Bra007038.1-P | Field mustard | cytosol | 43.46 | 52.53 |
| VIT_06s0004g05730.t01 | Wine grape | cytosol | 45.03 | 52.44 |
| KRH75751 | Soybean | endoplasmic reticulum | 44.5 | 51.83 |
| PGSC0003DMT400049227 | Potato | cytosol | 45.03 | 51.81 |
| KRH49226 | Soybean | cytosol | 42.41 | 51.59 |
| Bra003163.1-P | Field mustard | cytosol | 42.93 | 51.57 |
| CDX67580 | Canola | cytosol | 42.93 | 51.57 |
| CDY07565 | Canola | cytosol | 42.41 | 50.94 |
| AT3G53990.1 | Thale cress | cytosol | 42.41 | 50.62 |
| Solyc10g086670.1.1 | Tomato | cytosol | 43.98 | 50.6 |
| KRH62427 | Soybean | endoplasmic reticulum | 43.98 | 50.3 |
| GSMUA_Achr3P17670_001 | Banana | mitochondrion | 48.17 | 49.73 |
| CDX76180 | Canola | cytosol | 41.88 | 49.38 |
| CDY13163 | Canola | cytosol | 41.88 | 49.38 |
| Bra014852.1-P | Field mustard | cytosol | 41.88 | 49.38 |
| Zm00001d037573_P001 | Maize | cytosol | 41.36 | 47.31 |
| Zm00001d018229_P001 | Maize | mitochondrion | 40.31 | 46.67 |
| PGSC0003DMT400030609 | Potato | cytosol | 14.66 | 45.16 |
| Zm00001d038351_P004 | Maize | cytosol | 51.83 | 41.42 |
| Zm00001d008721_P001 | Maize | mitochondrion | 32.98 | 39.87 |
| CDY54033 | Canola | cytosol | 19.9 | 39.18 |
| Zm00001d011125_P001 | Maize | extracellular | 40.84 | 31.71 |
| Zm00001d008720_P002 | Maize | mitochondrion | 15.71 | 11.63 |
Protein Annotations
| EnsemblPlants:Zm00001d012382_P002 | EnsemblPlants:Zm00001d012382_T002 | EnsemblPlantsGene:Zm00001d012382 | Gene3D:3.40.50.620 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0016787 | InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA |
| InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF58 | PFAM:PF00582 | PRINTS:PR01438 | ProteinID:AQK99410.1 |
| SUPFAM:SSF52402 | UniParc:UPI00084469D2 | UniProt:A0A1D6G8D5 | MapMan:35.2 | : | : |
Description
Adenine nucleotide alpha hydrolases-like superfamily protein
Coordinates
chr8:+:173269610..173271090
Molecular Weight (calculated)
21664.7 Da
IEP (calculated)
9.794
GRAVY (calculated)
-0.088
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERKIGVAM DFSPSSKKAL RWAIDNLVRR GDTLVLLHVR HHGREEGKNV LWSRTGSRKS LLDCLALCTV MLIASQPLRW VFLNLMNRRA ALVPLEELME
101: PPVRQRYDVP YDAEVFDMLN AAARQKEMRV VVKMYWGDPR EKVCDAVEEL QIESLVMGSR GLGQIQRILL GSVTNYVLSN ASCPVTVVKS K
101: PPVRQRYDVP YDAEVFDMLN AAARQKEMRV VVKMYWGDPR EKVCDAVEEL QIESLVMGSR GLGQIQRILL GSVTNYVLSN ASCPVTVVKS K
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
Arabidopsis Description
AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.