Factsheet for GSMUA_Achr3P17670_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P17670_001
GSMUA_Achr6P23610_001
GSMUA_Achr9P03740_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53990.1	GSMUA_Achr3P17670_001	AT3G53990.1	21798944
AT3G53990.1	GSMUA_Achr6P23610_001	AT3G53990.1	21798944
AT3G53990.1	GSMUA_Achr9P03740_001	AT3G53990.1	21798944
AT3G53990.1	GSMUA_AchrUn_...	AT3G53990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P23610_001	Banana	cytosol	65.95	76.25
CDY54032	Canola	plastid	12.43	67.65
GSMUA_AchrUn_...	Banana	cytosol	47.57	66.67
KRH75751	Soybean	endoplasmic reticulum	58.38	65.85
VIT_08s0007g01430.t01	Wine grape	cytosol	56.76	64.02
KRH62427	Soybean	endoplasmic reticulum	57.3	63.47
Solyc09g011660.2.1	Tomato	cytosol	55.14	62.2
KRH24723	Soybean	nucleus	55.14	62.2
KRH29731	Soybean	endoplasmic reticulum	54.05	60.98
AT3G53990.1	Thale cress	cytosol	52.43	60.62
PGSC0003DMT400030606	Potato	cytosol	54.05	60.61
CDX73512	Canola	cytosol	51.35	60.51
Os01t0849600-01	Rice	cytosol, plastid	52.97	60.49
EES18332	Sorghum	cytosol	54.05	60.24
CDY13163	Canola	cytosol	52.43	59.88
KRH00077	Soybean	cytosol	50.81	59.87
Solyc09g011670.2.1	Tomato	cytosol, nucleus	52.97	59.76
TraesCS1B01G289700.1	Wheat	cytosol	53.51	59.64
TraesCS1D01G279800.1	Wheat	cytosol, golgi, unclear	53.51	59.64
Bra007038.1-P	Field mustard	cytosol	50.81	59.49
EES03887	Sorghum	cytosol	50.81	59.49
Bra014852.1-P	Field mustard	cytosol	51.89	59.26
CDX76180	Canola	cytosol	51.89	59.26
KRH49226	Soybean	cytosol	50.27	59.24
Bra003163.1-P	Field mustard	cytosol	50.81	59.12
CDX67580	Canola	cytosol	50.81	59.12
TraesCS1A01G280700.1	Wheat	cytosol	52.97	59.04
CDY07565	Canola	cytosol	50.27	58.49
PGSC0003DMT400049227	Potato	cytosol	51.89	57.83
GSMUA_Achr9P03740_001	Banana	cytosol	51.35	57.58
VIT_06s0004g05730.t01	Wine grape	cytosol	50.27	56.71
Solyc10g086670.1.1	Tomato	cytosol	50.81	56.63
PGSC0003DMT400030609	Potato	cytosol	17.84	53.23
Zm00001d012382_P002	Maize	cytosol	49.73	48.17
Os05t0453700-01	Rice	cytosol	48.11	47.09
HORVU3Hr1G085660.9	Barley	cytosol	48.65	46.63
GSMUA_Achr10P...	Banana	cytosol	40.0	45.68
GSMUA_Achr11P...	Banana	cytosol	37.84	43.21
GSMUA_Achr2P22060_001	Banana	cytosol	33.51	38.99
CDY54033	Canola	cytosol	20.0	38.14
Zm00001d038351_P004	Maize	cytosol	45.95	35.56
GSMUA_Achr8P06380_001	Banana	cytosol	12.43	35.38
GSMUA_Achr6P08870_001	Banana	extracellular, plasma membrane	15.68	12.24

Protein Annotations

EnsemblPlants:GSMUA_Achr3P17670_001	EnsemblPlants:GSMUA_Achr3T17670_001	EnsemblPlantsGene:GSMUA_Achr3G17670_001	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF23
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI00029693AD	UniProt:M0SFI3	MapMan:35.2

Description

Putative Uncharacterized protein C167.05 [Source:GMGC_GENE;Acc:GSMUA_Achr3G17670_001]

Coordinates

chr3:+:19176500..19181623

Molecular Weight (calculated)

20448.7 Da

IEP (calculated)

7.624

GRAVY (calculated)

-0.138

Length

185 amino acids

Sequence
(BLAST)

001: MWFTAAVTNH PQRASRRAAM TEGYSSTGGS DRKIGVALDF SKSSKAALGW ALGNLLRKGD TLILLHIIPT TGDEAKHLLW SQSGSPLIPL MEFRQPEVMK
101: HYDLDVDSEV LDMLDTSSRQ KEATIVTKLY WGDAREKLCH AAEDLNLDLL VMGSRGLSQI QRIMLGSVTN YVLTYAPCPV TVVKQ

Best Arabidopsis Sequence Match ( AT3G53990.1 )
(BLAST)

001: MPKDRNIGIA MDFSESSKNA LKWAIENLAD KGDTIYIIHT LPLSGDESRN SLWFKSGSPL IPLAEFREPE IMEKYGVKTD IACLDMLDTG SRQKEVHVVT
101: KLYWGDAREK LVDAVKDLKL DSIVMGSRGL SALQRIIMGS VSSFVIQHAP CPVTVVKDNE

Arabidopsis Description

AT3G53990 protein [Source:UniProtKB/TrEMBL;Acc:Q9M328]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.