Factsheet for GSMUA_Achr10P29500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50688	Canola	cytosol	62.35	63.52
Bra032002.1-P	Field mustard	cytosol	61.73	62.89
CDY43136	Canola	cytosol	61.73	62.89
VIT_04s0079g00610.t01	Wine grape	cytosol	60.49	59.76
KRH17289	Soybean	cytosol	61.11	59.64
Solyc04g014600.2.1	Tomato	nucleus	59.26	59.26
PGSC0003DMT400060724	Potato	cytosol	59.26	59.26
Zm00001d018229_P001	Maize	mitochondrion	59.88	58.79
TraesCS6A01G323800.1	Wheat	cytosol, mitochondrion, plastid	59.26	58.18
TraesCS6B01G354400.1	Wheat	golgi	59.26	58.18
TraesCS6D01G303600.1	Wheat	cytosol	59.26	58.18
EES05878	Sorghum	cytosol	59.26	58.18
KRH72936	Soybean	cytosol	52.47	57.82
Os02t0773200-01	Rice	cytosol	58.64	57.58
HORVU6Hr1G079150.1	Barley	cytosol, mitochondrion, plastid	58.02	56.97
GSMUA_Achr6P23610_001	Banana	cytosol	49.38	50.0
GSMUA_Achr11P...	Banana	cytosol	48.77	48.77
GSMUA_AchrUn_...	Banana	cytosol	38.89	47.73
AT3G03270.1	Thale cress	cytosol	56.17	45.27
GSMUA_Achr2P22060_001	Banana	cytosol	43.21	44.03
GSMUA_Achr9P03740_001	Banana	cytosol	43.21	42.42
GSMUA_Achr3P17670_001	Banana	mitochondrion	45.68	40.0
GSMUA_Achr8P06380_001	Banana	cytosol	15.43	38.46
GSMUA_Achr6P08870_001	Banana	extracellular, plasma membrane	15.43	10.55

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006950	GO:GO:0008150
GO:GO:0016020	GO:GO:0043621	EnsemblPlantsGene:GSMUA_Achr10G29500_001	EnsemblPlants:GSMUA_Achr10P29500_001	EnsemblPlants:GSMUA_Achr10T29500_001	InterPro:IPR014729
UniProt:M0RMH4	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF40	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	UniParc:UPI00026633FF	InterPro:Universal_stress_UspA	InterPro:UspA	SEG:seg	:

Description

Putative Universal stress protein A-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G29500_001]

Coordinates

chr10:+:31995850..31996806

Molecular Weight (calculated)

17517.1 Da

IEP (calculated)

6.144

GRAVY (calculated)

0.052

Length

162 amino acids

Sequence
(BLAST)

001: MAAEGSRTVG IGMDYSPTSK VAVRWAVDNL VCAGDHVVLI HVLSKSDHHT EKQLWEEHGS PLIPLGEFED MNLTVRYGIS PDGEVLDILH TASETKGVKV
101: VSKIYWGDPR EKICDAVEEL KLDSLVVGSR GLGAIKRVLL GSVSNYVVVH ATCPVTVVKS NA

Best Arabidopsis Sequence Match ( AT3G03270.2 )
(BLAST)

001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN

Arabidopsis Description

AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.