Factsheet for GSMUA_AchrUn_randomP26890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P17670_001
GSMUA_Achr6P23610_001
GSMUA_Achr9P03740_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53990.1	GSMUA_Achr3P17670_001	AT3G53990.1	21798944
AT3G53990.1	GSMUA_Achr6P23610_001	AT3G53990.1	21798944
AT3G53990.1	GSMUA_Achr9P03740_001	AT3G53990.1	21798944
AT3G53990.1	GSMUA_AchrUn_...	AT3G53990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03740_001	Banana	cytosol	75.0	60.0
VIT_08s0007g01430.t01	Wine grape	cytosol	66.67	53.66
Solyc09g011660.2.1	Tomato	cytosol	65.15	52.44
KRH75751	Soybean	endoplasmic reticulum	65.15	52.44
PGSC0003DMT400030606	Potato	cytosol	65.15	52.12
CDX73512	Canola	cytosol	60.61	50.96
KRH49226	Soybean	cytosol	60.61	50.96
GSMUA_Achr6P23610_001	Banana	cytosol	61.36	50.62
KRH29731	Soybean	endoplasmic reticulum	62.88	50.61
KRH00077	Soybean	cytosol	59.85	50.32
KRH62427	Soybean	endoplasmic reticulum	63.64	50.3
Solyc09g011670.2.1	Tomato	cytosol, nucleus	62.12	50.0
Bra007038.1-P	Field mustard	cytosol	59.85	50.0
Bra003163.1-P	Field mustard	cytosol	59.85	49.69
CDX67580	Canola	cytosol	59.85	49.69
KRH24723	Soybean	nucleus	61.36	49.39
CDY07565	Canola	cytosol	59.09	49.06
CDY13163	Canola	cytosol	59.85	48.77
CDX76180	Canola	cytosol	59.85	48.77
Bra014852.1-P	Field mustard	cytosol	59.85	48.77
AT3G53990.1	Thale cress	cytosol	59.09	48.75
VIT_06s0004g05730.t01	Wine grape	cytosol	59.85	48.17
GSMUA_Achr3P17670_001	Banana	mitochondrion	66.67	47.57
PGSC0003DMT400049227	Potato	cytosol	53.03	42.17
PGSC0003DMT400030609	Potato	cytosol	19.7	41.94
Solyc10g086670.1.1	Tomato	cytosol	52.27	41.57
GSMUA_Achr10P...	Banana	cytosol	47.73	38.89
CDY54033	Canola	cytosol	27.27	37.11
GSMUA_Achr8P06380_001	Banana	cytosol	15.91	32.31
GSMUA_Achr11P...	Banana	cytosol	38.64	31.48
GSMUA_Achr2P22060_001	Banana	cytosol	34.85	28.93
CDY54032	Canola	plastid	6.06	23.53
GSMUA_Achr6P08870_001	Banana	extracellular, plasma membrane	15.15	8.44

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP26890_001	EnsemblPlants:GSMUA_AchrUn_randomT26890_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG26890_001	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF23	PFAM:PF00582
SEG:seg	SUPFAM:SSF52402	UniParc:UPI000294BED2	UniProt:M0UCP7	MapMan:35.2	:

Description

Putative Universal stress protein A-like protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG26890_001]

Coordinates

chrchrUn_random:+:131711999..131712621

Molecular Weight (calculated)

14668.7 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.221

Length

132 amino acids

Sequence
(BLAST)

001: MGGDRKIGVA LDFSGSSKRA LQWTIDNLLD IGETLIVIHV LRPKSSSGSK HSDSPPLIPL TEFRELEVMK RYDVEVDIDV LDMLDTASRQ KEATIVVKLY
101: NGDAREKLCE AVEELKLDSL VMGSRGLGQI QR

Best Arabidopsis Sequence Match ( AT3G03270.1 )
(BLAST)

001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRPNHNG FMIIMFDHSL VGLVSLDHDQ SGLINMAEMG SSKSICWIRR NQERDSRWSF SDLLLDDHPL
201: D

Arabidopsis Description

AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.