Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54032 | Canola | plastid | 21.25 | 100.0 |
| Bra003163.1-P | Field mustard | cytosol | 90.0 | 90.57 |
| CDX67580 | Canola | cytosol | 90.0 | 90.57 |
| CDY07565 | Canola | cytosol | 88.75 | 89.31 |
| CDX73512 | Canola | cytosol | 86.88 | 88.53 |
| Bra007038.1-P | Field mustard | cytosol | 86.25 | 87.34 |
| Bra014852.1-P | Field mustard | cytosol | 88.12 | 87.04 |
| CDX76180 | Canola | cytosol | 88.12 | 87.04 |
| CDY13163 | Canola | cytosol | 88.12 | 87.04 |
| KRH75751 | Soybean | endoplasmic reticulum | 75.62 | 73.78 |
| Solyc09g011670.2.1 | Tomato | cytosol, nucleus | 73.12 | 71.34 |
| KRH62427 | Soybean | endoplasmic reticulum | 73.75 | 70.66 |
| VIT_08s0007g01430.t01 | Wine grape | cytosol | 70.62 | 68.9 |
| KRH49226 | Soybean | cytosol | 67.5 | 68.79 |
| KRH00077 | Soybean | cytosol | 66.88 | 68.15 |
| PGSC0003DMT400030606 | Potato | cytosol | 70.0 | 67.88 |
| Solyc09g011660.2.1 | Tomato | cytosol | 68.75 | 67.07 |
| PGSC0003DMT400030609 | Potato | cytosol | 23.75 | 61.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.75 | 59.09 |
| EES18332 | Sorghum | cytosol | 61.25 | 59.04 |
| GSMUA_Achr6P23610_001 | Banana | cytosol | 56.88 | 56.88 |
| TraesCS1D01G279800.1 | Wheat | cytosol, golgi, unclear | 56.88 | 54.82 |
| PGSC0003DMT400049227 | Potato | cytosol | 56.88 | 54.82 |
| Solyc10g086670.1.1 | Tomato | cytosol | 56.88 | 54.82 |
| TraesCS1B01G289700.1 | Wheat | cytosol | 56.88 | 54.82 |
| TraesCS1A01G280700.1 | Wheat | cytosol | 55.62 | 53.61 |
| GSMUA_Achr3P17670_001 | Banana | mitochondrion | 60.62 | 52.43 |
| EES03887 | Sorghum | cytosol | 51.25 | 51.9 |
| Os01t0849600-01 | Rice | cytosol, plastid | 50.62 | 50.0 |
| GSMUA_Achr9P03740_001 | Banana | cytosol | 48.75 | 47.27 |
| Os05t0453700-01 | Rice | cytosol | 51.88 | 43.92 |
| Zm00001d012382_P002 | Maize | cytosol | 50.62 | 42.41 |
| HORVU3Hr1G085660.9 | Barley | cytosol | 47.5 | 39.38 |
| AT3G03270.1 | Thale cress | cytosol | 49.38 | 39.3 |
| AT3G17020.1 | Thale cress | cytosol | 38.75 | 38.04 |
| Zm00001d038351_P004 | Maize | cytosol | 51.88 | 34.73 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:824566 | UniProt:A0A178VG52 | ProteinID:AEE79170.1 | EMBL:AF324682 |
| EMBL:AF325038 | EMBL:AF326902 | EMBL:AF339721 | EMBL:AF361855 | EMBL:AK220607 | EMBL:AK317067 |
| ArrayExpress:AT3G53990 | EnsemblPlantsGene:AT3G53990 | RefSeq:AT3G53990 | TAIR:AT3G53990 | RefSeq:AT3G53990-TAIR-G | EnsemblPlants:AT3G53990.1 |
| TAIR:AT3G53990.1 | EMBL:AY052325 | EMBL:AY061900 | EMBL:AY070476 | Unigene:At.23225 | ProteinID:CAB88361.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009409 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0034337 | GO:GO:0061077 | InterPro:IPR014729 | RefSeq:NP_566991.2 |
| ProteinID:OAP05299.1 | PFAM:PF00582 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01438 | PANTHER:PTHR31964 |
| PANTHER:PTHR31964:SF23 | UniProt:Q9M328 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 | UniParc:UPI000009EADB | InterPro:Universal_stress_UspA |
| InterPro:UspA | : | : | : | : | : |
Description
AT3G53990 protein [Source:UniProtKB/TrEMBL;Acc:Q9M328]
Coordinates
chr3:-:19989292..19991186
Molecular Weight (calculated)
17794.5 Da
IEP (calculated)
5.722
GRAVY (calculated)
-0.168
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKDRNIGIA MDFSESSKNA LKWAIENLAD KGDTIYIIHT LPLSGDESRN SLWFKSGSPL IPLAEFREPE IMEKYGVKTD IACLDMLDTG SRQKEVHVVT
101: KLYWGDAREK LVDAVKDLKL DSIVMGSRGL SALQRIIMGS VSSFVIQHAP CPVTVVKDNE
101: KLYWGDAREK LVDAVKDLKL DSIVMGSRGL SALQRIIMGS VSSFVIQHAP CPVTVVKDNE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.