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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50688 Canola cytosol 66.17 83.65
Bra032002.1-P Field mustard cytosol 65.67 83.02
CDY43136 Canola cytosol 65.67 83.02
KRH17289 Soybean cytosol 51.24 62.05
VIT_04s0079g00610.t01 Wine grape cytosol 49.75 60.98
Solyc04g014600.2.1 Tomato nucleus 45.77 56.79
PGSC0003DMT400060724 Potato cytosol 45.77 56.79
KRH72936 Soybean cytosol 41.29 56.46
GSMUA_Achr10P... Banana cytosol 45.27 56.17
Zm00001d018229_P001 Maize mitochondrion 41.29 50.3
EES05878 Sorghum cytosol 41.29 50.3
TraesCS6A01G323800.1 Wheat cytosol, mitochondrion, plastid 40.8 49.7
TraesCS6B01G354400.1 Wheat golgi 40.8 49.7
TraesCS6D01G303600.1 Wheat cytosol 40.8 49.7
AT3G53990.1 Thale cress cytosol 39.3 49.38
Os02t0773200-01 Rice cytosol 40.3 49.09
HORVU6Hr1G079150.1 Barley cytosol, mitochondrion, plastid 40.3 49.09
AT3G17020.1 Thale cress cytosol 30.35 37.42
Protein Annotations
Gene3D:3.40.50.620MapMan:35.2EntrezGene:821303ProteinID:AEE73919.1EMBL:AK317100ArrayExpress:AT3G03270
EnsemblPlantsGene:AT3G03270RefSeq:AT3G03270TAIR:AT3G03270RefSeq:AT3G03270-TAIR-GEnsemblPlants:AT3G03270.1TAIR:AT3G03270.1
EMBL:AY084798EMBL:BT002765GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005886GO:GO:0006950
GO:GO:0008150GO:GO:0016020GO:GO:0016787GO:GO:0043621InterPro:IPR014729RefSeq:NP_566198.1
PFAM:PF00582PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR31964PANTHER:PTHR31964:SF40UniProt:Q8LFK2InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402UniParc:UPI000000BDAEInterPro:UspASEG:seg::
Description
AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
Coordinates
chr3:-:761134..763115
Molecular Weight (calculated)
22603.1 Da
IEP (calculated)
5.618
GRAVY (calculated)
-0.281
Length
201 amino acids
Sequence
(BLAST)
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRPNHNG FMIIMFDHSL VGLVSLDHDQ SGLINMAEMG SSKSICWIRR NQERDSRWSF SDLLLDDHPL
201: D
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.