Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY50688 | Canola | cytosol | 66.17 | 83.65 |
Bra032002.1-P | Field mustard | cytosol | 65.67 | 83.02 |
CDY43136 | Canola | cytosol | 65.67 | 83.02 |
KRH17289 | Soybean | cytosol | 51.24 | 62.05 |
VIT_04s0079g00610.t01 | Wine grape | cytosol | 49.75 | 60.98 |
Solyc04g014600.2.1 | Tomato | nucleus | 45.77 | 56.79 |
PGSC0003DMT400060724 | Potato | cytosol | 45.77 | 56.79 |
KRH72936 | Soybean | cytosol | 41.29 | 56.46 |
GSMUA_Achr10P... | Banana | cytosol | 45.27 | 56.17 |
Zm00001d018229_P001 | Maize | mitochondrion | 41.29 | 50.3 |
EES05878 | Sorghum | cytosol | 41.29 | 50.3 |
TraesCS6A01G323800.1 | Wheat | cytosol, mitochondrion, plastid | 40.8 | 49.7 |
TraesCS6B01G354400.1 | Wheat | golgi | 40.8 | 49.7 |
TraesCS6D01G303600.1 | Wheat | cytosol | 40.8 | 49.7 |
AT3G53990.1 | Thale cress | cytosol | 39.3 | 49.38 |
Os02t0773200-01 | Rice | cytosol | 40.3 | 49.09 |
HORVU6Hr1G079150.1 | Barley | cytosol, mitochondrion, plastid | 40.3 | 49.09 |
AT3G17020.1 | Thale cress | cytosol | 30.35 | 37.42 |
Protein Annotations
Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:821303 | ProteinID:AEE73919.1 | EMBL:AK317100 | ArrayExpress:AT3G03270 |
EnsemblPlantsGene:AT3G03270 | RefSeq:AT3G03270 | TAIR:AT3G03270 | RefSeq:AT3G03270-TAIR-G | EnsemblPlants:AT3G03270.1 | TAIR:AT3G03270.1 |
EMBL:AY084798 | EMBL:BT002765 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006950 |
GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0043621 | InterPro:IPR014729 | RefSeq:NP_566198.1 |
PFAM:PF00582 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF40 | UniProt:Q8LFK2 | InterPro:Rossmann-like_a/b/a_fold |
SUPFAM:SSF52402 | UniParc:UPI000000BDAE | InterPro:UspA | SEG:seg | : | : |
Description
AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
Coordinates
chr3:-:761134..763115
Molecular Weight (calculated)
22603.1 Da
IEP (calculated)
5.618
GRAVY (calculated)
-0.281
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRPNHNG FMIIMFDHSL VGLVSLDHDQ SGLINMAEMG SSKSICWIRR NQERDSRWSF SDLLLDDHPL
201: D
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRPNHNG FMIIMFDHSL VGLVSLDHDQ SGLINMAEMG SSKSICWIRR NQERDSRWSF SDLLLDDHPL
201: D
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.