Factsheet for Bra032002.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43136	Canola	cytosol	100.0	100.0
KRH17289	Soybean	cytosol	71.7	68.67
VIT_04s0079g00610.t01	Wine grape	cytosol	68.55	66.46
AT3G03270.1	Thale cress	cytosol	83.02	65.67
Solyc04g014600.2.1	Tomato	nucleus	65.41	64.2
PGSC0003DMT400060724	Potato	cytosol	65.41	64.2
KRH72936	Soybean	cytosol	59.12	63.95
GSMUA_Achr10P...	Banana	cytosol	62.89	61.73
TraesCS6D01G303600.1	Wheat	cytosol	59.75	57.58
TraesCS6B01G354400.1	Wheat	golgi	59.75	57.58
TraesCS6A01G323800.1	Wheat	cytosol, mitochondrion, plastid	59.75	57.58
EES05878	Sorghum	cytosol	59.75	57.58
HORVU6Hr1G079150.1	Barley	cytosol, mitochondrion, plastid	59.12	56.97
Zm00001d018229_P001	Maize	mitochondrion	58.49	56.36
Os02t0773200-01	Rice	cytosol	58.49	56.36
Bra003163.1-P	Field mustard	cytosol	54.72	54.72
Bra007038.1-P	Field mustard	cytosol	54.09	54.43
Bra014852.1-P	Field mustard	cytosol	54.72	53.7
Bra038472.1-P	Field mustard	cytosol	21.38	44.74
Bra022190.1-P	Field mustard	cytosol	45.28	44.17
Bra021214.1-P	Field mustard	cytosol	45.28	44.17
Bra001649.1-P	Field mustard	cytosol	44.65	43.56

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.2	EnsemblPlantsGene:Bra032002	EnsemblPlants:Bra032002.1	EnsemblPlants:Bra032002.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005886	GO:GO:0006950	GO:GO:0008150	GO:GO:0016020	GO:GO:0043621	InterPro:IPR014729
UniProt:M4ET72	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF40	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	UniParc:UPI000254616B	InterPro:Universal_stress_UspA	InterPro:UspA	SEG:seg	:

Description

AT3G03270 (E=6e-076) | universal stress protein (USP) family protein / early nodulin ENOD18 family protein

Coordinates

chrA02:-:26704730..26705676

Molecular Weight (calculated)

17561.3 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.126

Length

159 amino acids

Sequence
(BLAST)

001: MVKARTVGVG MDYSPTSKSA LRWTAENLLD DGDTIILIHV QPQNAEHTRK ILFEETGSPL IPLEEFREVN FSKQYGLAYD PEVLNVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GPLKRMLLGS VSNHVVTNAT CPVTVVKAN

Best Arabidopsis Sequence Match ( AT3G03270.2 )
(BLAST)

001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN

Arabidopsis Description

AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.