Factsheet for Bra001649.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
peroxisome 1
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82383	Canola	cytosol	98.16	98.16
CDX75899	Canola	cytosol	98.16	98.16
Bra021214.1-P	Field mustard	cytosol	94.48	94.48
Bra022190.1-P	Field mustard	cytosol	92.64	92.64
Bra038472.1-P	Field mustard	cytosol	41.72	89.47
AT3G17020.1	Thale cress	cytosol	87.73	87.73
VIT_05s0077g01070.t01	Wine grape	cytosol	70.55	69.7
Solyc01g059930.2.1	Tomato	cytosol, extracellular	66.26	66.26
PGSC0003DMT400056226	Potato	cytosol, extracellular	66.26	66.26
KRH11952	Soybean	cytosol	63.19	62.8
GSMUA_Achr11P...	Banana	cytosol	61.96	62.35
TraesCS1D01G108300.1	Wheat	peroxisome	56.44	55.42
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	56.44	55.09
TraesCS1A01G106600.1	Wheat	peroxisome	55.83	54.82
EES19072	Sorghum	cytosol	52.76	51.5
Zm00001d037573_P001	Maize	cytosol	52.76	51.5
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	44.17	49.66
Bra032002.1-P	Field mustard	cytosol	43.56	44.65
GSMUA_Achr8P06380_001	Banana	cytosol	17.79	44.62
Bra007038.1-P	Field mustard	cytosol	42.94	44.3
Bra003163.1-P	Field mustard	cytosol	41.72	42.77
HORVU1Hr1G023260.1	Barley	plastid	55.83	41.36
TraesCS1B01G124100.1	Wheat	cytosol	49.69	41.12
Bra014852.1-P	Field mustard	cytosol	40.49	40.74
Zm00001d011125_P001	Maize	extracellular	51.53	34.15

Protein Annotations

EnsemblPlants:Bra001649.1	EnsemblPlants:Bra001649.1-P	EnsemblPlantsGene:Bra001649	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65
PFAM:PF00582	PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	UniParc:UPI0002540AD6	UniProt:M4CBR9
MapMan:35.2	:	:	:	:	:

Description

AT3G17020 (E=1e-072) | universal stress protein (USP) family protein

Coordinates

chrA03:-:17688993..17689904

Molecular Weight (calculated)

17877.7 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.011

Length

163 amino acids

Sequence
(BLAST)

001: MEESNGRKIG VAVDFSECSK KALNWAIDNV VRDGDHLILI TVAHDMHYEE GEMQLWETVG SPLIPLSEFS EAAVMKKYAV KPDAETLDIA NTAARTKSIT
101: VVMKIYWGDP REKICEAVEH IPLASLVIGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHH

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.