Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
19621931
plasma membrane: 27800704 plastid: 27992503 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G108300.1 | Wheat | peroxisome | 82.04 | 82.53 |
TraesCS1A01G106600.1 | Wheat | peroxisome | 81.44 | 81.93 |
Zm00001d037573_P001 | Maize | cytosol | 78.44 | 78.44 |
EES19072 | Sorghum | cytosol | 78.44 | 78.44 |
GSMUA_Achr11P... | Banana | cytosol | 63.47 | 65.43 |
HORVU1Hr1G023260.1 | Barley | plastid | 82.04 | 62.27 |
VIT_05s0077g01070.t01 | Wine grape | cytosol | 61.08 | 61.82 |
TraesCS1B01G124100.1 | Wheat | cytosol | 70.06 | 59.39 |
CDY34988 | Canola | cytosol | 56.29 | 57.67 |
CDY52729 | Canola | cytosol | 56.29 | 57.67 |
Solyc01g059930.2.1 | Tomato | cytosol, extracellular | 56.29 | 57.67 |
Bra021214.1-P | Field mustard | cytosol | 56.29 | 57.67 |
CDX92110 | Canola | cytosol | 55.69 | 57.06 |
CDX75899 | Canola | cytosol | 55.69 | 57.06 |
Bra022190.1-P | Field mustard | cytosol | 55.69 | 57.06 |
PGSC0003DMT400056226 | Potato | cytosol, extracellular | 55.69 | 57.06 |
Bra038472.1-P | Field mustard | cytosol | 25.75 | 56.58 |
Bra001649.1-P | Field mustard | cytosol | 55.09 | 56.44 |
CDX82383 | Canola | cytosol | 55.09 | 56.44 |
CDY69106 | Canola | cytosol | 25.15 | 55.26 |
AT3G17020.1 | Thale cress | cytosol | 52.69 | 53.99 |
CDY67360 | Canola | cytosol | 21.56 | 53.73 |
CDY44517 | Canola | cytosol | 20.96 | 52.24 |
Zm00001d011125_P001 | Maize | extracellular | 76.65 | 52.03 |
Os01t0849600-01 | Rice | cytosol, plastid | 49.1 | 50.62 |
KRH11952 | Soybean | cytosol | 49.7 | 50.61 |
GSMUA_Achr8P06380_001 | Banana | cytosol | 18.56 | 47.69 |
Os02t0773200-01 | Rice | cytosol | 46.71 | 47.27 |
CDX95890 | Canola | cytosol | 55.09 | 47.18 |
Os05t0453700-01 | Rice | cytosol | 46.11 | 40.74 |
Os05t0170200-02 | Rice | extracellular | 48.5 | 39.9 |
KRH36979 | Soybean | endoplasmic reticulum, extracellular, vacuole | 34.13 | 39.31 |
Os01t0170600-01 | Rice | extracellular | 17.37 | 10.66 |
Protein Annotations
Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:4337867 | ProteinID:AAS55767.1 | EMBL:AK065771 | ProteinID:BAF16618.1 |
ProteinID:BAS92372.1 | ProteinID:EEE62397.1 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 |
GO:GO:0008150 | GO:GO:0009409 | GO:GO:0009628 | GO:GO:0016020 | InterPro:IPR014729 | EnsemblPlantsGene:Os05g0157200 |
EnsemblPlants:Os05t0157200-01 | PFAM:PF00582 | PRINTS:PR01438 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF65 | UniProt:Q75M01 |
InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 | UniParc:UPI0000253D7D | InterPro:Universal_stress_UspA | InterPro:UspA | RefSeq:XP_015639921.1 |
SEG:seg | : | : | : | : | : |
Description
UspA domain containing protein. (Os05t0157200-01)
Coordinates
chr5:-:3345130..3347246
Molecular Weight (calculated)
18004.7 Da
IEP (calculated)
5.003
GRAVY (calculated)
0.044
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEAAAAER WVGAAVDFSE GSRAALRWAA DNLLRAGDHL ILLHVLKDPD YEQGETLLWE ATGSPLIPLS DFSEPTIAKK YGAKPDAETL DMLNTVARQK
101: EVVVVFKVLW GDPREKLCQA INEIPMSCLV IGSRGLGKLK RVLLGSVSDY VVNNATCPVT VVKTADG
101: EVVVVFKVLW GDPREKLCQA INEIPMSCLV IGSRGLGKLK RVLLGSVSDY VVNNATCPVT VVKTADG
001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
Arabidopsis Description
AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.