Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 7
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
18372294
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G092100.1 | Wheat | mitochondrion | 36.4 | 38.22 |
| TraesCS3D01G092000.1 | Wheat | mitochondrion | 33.82 | 36.36 |
| KXG31754 | Sorghum | mitochondrion, plastid | 25.74 | 27.34 |
| Zm00001d008720_P002 | Maize | mitochondrion | 20.59 | 21.71 |
| GSMUA_Achr6P08870_001 | Banana | extracellular, plasma membrane | 16.91 | 19.41 |
| Os01t0849600-01 | Rice | cytosol, plastid | 10.66 | 17.9 |
| Os05t0157200-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 10.66 | 17.37 |
| Os05t0170200-02 | Rice | extracellular | 11.76 | 15.76 |
| Os02t0773200-01 | Rice | cytosol | 9.56 | 15.76 |
| Os05t0453700-01 | Rice | cytosol | 9.19 | 13.23 |
Protein Annotations
| EnsemblPlants:Os01t0170600-01 | EnsemblPlantsGene:Os01g0170600 | EntrezGene:107275258 | EntrezGene:4327636 | GO:GO:0006950 | GO:GO:0008150 |
| ProteinID:BAS70613.1 | RefSeq:XP_015622195.1 | RefSeq:XP_015622196.1 | SEG:seg | UniParc:UPI000224C439 | UniProt:A0A0P0UZF8 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical conserved gene. (Os01t0170600-01);UspA domain containing protein. (Os01t0170600-02)
Coordinates
chr1:+:3645508..3648396
Molecular Weight (calculated)
29739.1 Da
IEP (calculated)
10.776
GRAVY (calculated)
0.006
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWRGLARDA AAAYLRRGGA PAHVFSAASR APGPVVANPG GELRAFGLFR SPMARRADAF EVPSAAGRHG AQGVWSRSSV PALVRAGAPN SRALPFLVGR
101: VVRGFYPQLS GHKLVKGLGM GSTLAATFCS QKVAYAEEVA EQPSEGLIGP STKHQISKLW TIIRKYQLPV GLIALIALGW QNPLGLFINV LLILYSSRPS
201: PYSIYLFLQE VRHGEMHQNR AFWKEEAVLT RKVDTKDYKL FSIGTVESAD REVLHVIGIL GNWWIYRASY GK
101: VVRGFYPQLS GHKLVKGLGM GSTLAATFCS QKVAYAEEVA EQPSEGLIGP STKHQISKLW TIIRKYQLPV GLIALIALGW QNPLGLFINV LLILYSSRPS
201: PYSIYLFLQE VRHGEMHQNR AFWKEEAVLT RKVDTKDYKL FSIGTVESAD REVLHVIGIL GNWWIYRASY GK
001: MDEVSPAVAV PFRPFTDPHA GLRGYCNGVD ISAGDEINGS DEFDPRSMNQ SEKKVLSRTE SRSLFEFKCV PLYGVTSICG RRPEMEDSVS TIPRFLQVSS
101: SSLLDGRVTN GFNPHLSAHF FGVYDGHGGS QVANYCRERM HLALTEEIVK EKPEFCDGDT WQEKWKKALF NSFMRVDSEI ETVAHAPETV GSTSVVAVVF
201: PTHIFVANCG DSRAVLCRGK TPLALSVDHK PDRDDEAARI EAAGGKVIRW NGARVFGVLA MSRSIGDRYL KPSVIPDPEV TSVRRVKEDD CLILASDGLW
301: DVMTNEEVCD LARKRILLWH KKNAMAGEAL LPAEKRGEGK DPAAMSAAEY LSKMALQKGS KDNISVVVVD LKGIRKFKSK SLN
101: SSLLDGRVTN GFNPHLSAHF FGVYDGHGGS QVANYCRERM HLALTEEIVK EKPEFCDGDT WQEKWKKALF NSFMRVDSEI ETVAHAPETV GSTSVVAVVF
201: PTHIFVANCG DSRAVLCRGK TPLALSVDHK PDRDDEAARI EAAGGKVIRW NGARVFGVLA MSRSIGDRYL KPSVIPDPEV TSVRRVKEDD CLILASDGLW
301: DVMTNEEVCD LARKRILLWH KKNAMAGEAL LPAEKRGEGK DPAAMSAAEY LSKMALQKGS KDNISVVVVD LKGIRKFKSK SLN
Arabidopsis Description
ABI2AtABI2 [Source:UniProtKB/TrEMBL;Acc:A0A178UGB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.