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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • mitochondrion 6
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion, peroxisome, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 extracellular: 25047395
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG21431 Sorghum cytosol, mitochondrion, plastid 59.61 66.12
GSMUA_Achr2P22060_001 Banana cytosol 46.31 59.12
Os05t0157200-01 Rice cytosol, nucleus, plasma membrane, plastid 39.9 48.5
Os01t0849600-01 Rice cytosol, plastid 33.5 41.98
Os02t0773200-01 Rice cytosol 33.0 40.61
Os05t0453700-01 Rice cytosol 33.5 35.98
Os01t0170600-01 Rice extracellular 15.76 11.76
Protein Annotations
EMBL:AK063611EnsemblPlants:Os05t0170200-02EnsemblPlantsGene:Os05g0170200EntrezGene:4337936Gene3D:3.40.50.620GO:GO:0006950
GO:GO:0008150InterPro:IPR014729InterPro:Rossmann-like_a/b/a_foldInterPro:Universal_stress_UspAInterPro:UspAPANTHER:PTHR31964
PANTHER:PTHR31964:SF54PFAM:PF00582PRINTS:PR01438ProteinID:AAU44327.1ProteinID:BAS92479.1RefSeq:XP_015638463.1
SEG:segSUPFAM:SSF52402UniParc:UPI000043F3D7UniProt:Q65XS4MapMan:35.2:
Description
Similar to Universal stress protein. (Os05t0170200-01);Similar to universal stress protein family protein. (Os05t0170200-02)
Coordinates
chr5:+:4205610..4207693
Molecular Weight (calculated)
21654.4 Da
IEP (calculated)
10.080
GRAVY (calculated)
-0.014
Length
203 amino acids
Sequence
(BLAST)
001: MICMRDRSRR GVARERMAAV SVGGGGRNIG VAMDFSACSK AALRWAAASL ARPGDRLVLV HVKPSFQYEQ GVAHLWEQQG SPMIPLVELA DPRVSRIYGV
101: APDAETIGIL TSAANQKGVE VVAKVYWGEP AKKLTEAAQG IPLHWLVVGN RGLGAVKRVL MGSVSTYVAN HATCPVTVVR ENLPPPPPPP QPPQPVATAA
201: SYY
Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)
001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
Arabidopsis Description
AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.