Factsheet for Zm00001d011125_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 2
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037573_P001	Maize	cytosol	63.82	94.01
TraesCS1D01G108300.1	Wheat	peroxisome	52.44	77.71
TraesCS1A01G106600.1	Wheat	peroxisome	52.03	77.11
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	52.03	76.65
HORVU1Hr1G023260.1	Barley	plastid	55.28	61.82
GSMUA_Achr11P...	Banana	cytosol	40.24	61.11
VIT_05s0077g01070.t01	Wine grape	cytosol	40.24	60.0
Solyc01g059930.2.1	Tomato	cytosol, extracellular	37.8	57.06
PGSC0003DMT400056226	Potato	cytosol, extracellular	37.4	56.44
TraesCS1B01G124100.1	Wheat	cytosol	44.31	55.33
CDX92110	Canola	cytosol	34.96	52.76
Bra022190.1-P	Field mustard	cytosol	34.96	52.76
CDY34988	Canola	cytosol	34.96	52.76
CDY52729	Canola	cytosol	34.96	52.76
Bra021214.1-P	Field mustard	cytosol	34.96	52.76
Bra038472.1-P	Field mustard	cytosol	16.26	52.63
CDX75899	Canola	cytosol	34.55	52.15
Bra001649.1-P	Field mustard	cytosol	34.15	51.53
CDX82383	Canola	cytosol	34.15	51.53
CDY69106	Canola	cytosol	15.85	51.32
AT3G17020.1	Thale cress	cytosol	33.74	50.92
CDY67360	Canola	cytosol	13.82	50.75
KRH11952	Soybean	cytosol	32.93	49.39
Zm00001d008721_P001	Maize	mitochondrion	31.3	48.73
CDY44517	Canola	cytosol	13.01	47.76
CDX95890	Canola	cytosol	36.99	46.67
GSMUA_Achr8P06380_001	Banana	cytosol	12.2	46.15
Zm00001d018229_P001	Maize	mitochondrion	30.89	46.06
Zm00001d012382_P002	Maize	cytosol	31.71	40.84
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	23.17	39.31
Zm00001d038351_P004	Maize	cytosol	28.86	29.71
Zm00001d008720_P002	Maize	mitochondrion	10.98	10.47

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.2	ProteinID:AQK95807.1	GO:GO:0005575	GO:GO:0006950	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	InterPro:IPR014729	UniProt:K7V2N6	PFAM:PF00582	PRINTS:PR01438
PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	TMHMM:TMhelix	UniParc:UPI000221E14E
InterPro:Universal_stress_UspA	InterPro:UspA	EnsemblPlantsGene:Zm00001d011125	EnsemblPlants:Zm00001d011125_P001	EnsemblPlants:Zm00001d011125_T001	SEG:seg

Description

Putative USP family protein

Coordinates

chr8:+:139738103..139742326

Molecular Weight (calculated)

27077.2 Da

IEP (calculated)

5.027

GRAVY (calculated)

-0.280

Length

246 amino acids

Sequence
(BLAST)

001: MTKNVCTEKE MGQGQGSKYA GIIVTATCTS VASVLWLWHQ SNRQEATSTT AIRSPYSDPH EVKNLYEERK EPGREELEEM ASAEGERWVG LATDFSQGSR
101: EALQWAATNL LRAGDHLLLL HVIKEPDYEQ SEAILWESTG SPLIPLSEFS DPIIAKKYGA KPDMETLDLL NTTATQKEIM VVVKVLWGDP REKLCQVIHD
201: TPLSCLVIGS RGLGKLKRVL LGSVSDYVVN NATCPVTVVK SSSTEG

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.