Factsheet for TraesCS1B01G124100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G108300.1	Wheat	peroxisome	69.54	82.53
TraesCS1A01G106600.1	Wheat	peroxisome	69.54	82.53
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	59.39	70.06
EES19072	Sorghum	cytosol	55.84	65.87
Zm00001d037573_P001	Maize	cytosol	55.33	65.27
HORVU1Hr1G023260.1	Barley	plastid	69.54	62.27
Bra022190.1-P	Field mustard	cytosol	43.15	52.15
CDX92110	Canola	cytosol	43.15	52.15
Bra021214.1-P	Field mustard	cytosol	42.64	51.53
CDY34988	Canola	cytosol	42.64	51.53
CDY52729	Canola	cytosol	42.64	51.53
VIT_05s0077g01070.t01	Wine grape	cytosol	43.15	51.52
CDX82383	Canola	cytosol	42.13	50.92
CDX75899	Canola	cytosol	41.62	50.31
GSMUA_Achr11P...	Banana	cytosol	41.12	50.0
PGSC0003DMT400056226	Potato	cytosol, extracellular	41.12	49.69
Solyc01g059930.2.1	Tomato	cytosol, extracellular	41.12	49.69
Bra001649.1-P	Field mustard	cytosol	41.12	49.69
TraesCS3B01G107200.1	Wheat	mitochondrion	40.1	49.38
AT3G17020.1	Thale cress	cytosol	39.59	47.85
Zm00001d011125_P001	Maize	extracellular	55.33	44.31
TraesCS1B01G289700.1	Wheat	cytosol	37.06	43.98
CDX95890	Canola	cytosol	43.15	43.59
KRH11952	Soybean	cytosol	35.53	42.68
CDY69106	Canola	cytosol	16.24	42.11
Bra038472.1-P	Field mustard	cytosol	16.24	42.11
CDY67360	Canola	cytosol	13.2	38.81
CDY44517	Canola	cytosol	13.2	38.81
GSMUA_Achr8P06380_001	Banana	cytosol	12.69	38.46
TraesCS6B01G354400.1	Wheat	golgi	31.47	37.58
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	23.86	32.41

Protein Annotations

EnsemblPlants:TraesCS1B01G124100.1	EnsemblPlantsGene:TraesCS1B01G124100	Gene3D:3.40.50.620	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006950	GO:GO:0008150	GO:GO:0009409	GO:GO:0009628	GO:GO:0016020	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	PFAM:PF00582	SEG:seg
SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1B:+:150662511..150664064

Molecular Weight (calculated)

22004.8 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.216

Length

197 amino acids

Sequence
(BLAST)

001: MAADGERWVG LAVDFSEGSR AALQWAADNL LRAGDNLLLL HVLKDPDYEQ GETLLWEASG SPLIPLSEFS HPSTAKKYGV KPDAETLDML NTIAKQKEVA
101: VVSKVLFGDP REKLCQAIHD MPISCLVIGS RGLGKLKRLR PPTKLTSKLF FSHIVCLFHH NRVLIFCISE LQGALGQRQR LRREQRRLPG HRCQASE

Best Arabidopsis Sequence Match ( AT3G17020.2 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTSI
101: KIMIPKDGDL PVADSL

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.