CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037573_P001	Maize	cytosol	98.2	98.2
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	78.44	78.44
TraesCS1D01G108300.1	Wheat	peroxisome	77.84	78.31
TraesCS1A01G106600.1	Wheat	peroxisome	77.25	77.71
GSMUA_Achr11P...	Banana	cytosol	61.08	62.96
VIT_05s0077g01070.t01	Wine grape	cytosol	59.88	60.61
HORVU1Hr1G023260.1	Barley	plastid	79.04	60.0
Solyc01g059930.2.1	Tomato	cytosol, extracellular	55.69	57.06
PGSC0003DMT400056226	Potato	cytosol, extracellular	55.09	56.44
TraesCS1B01G124100.1	Wheat	cytosol	65.87	55.84
CDX92110	Canola	cytosol	52.69	53.99
CDY34988	Canola	cytosol	52.69	53.99
CDY52729	Canola	cytosol	52.69	53.99
Bra022190.1-P	Field mustard	cytosol	52.69	53.99
Bra021214.1-P	Field mustard	cytosol	52.69	53.99
Bra038472.1-P	Field mustard	cytosol	24.55	53.95
CDX75899	Canola	cytosol	52.1	53.37
Bra001649.1-P	Field mustard	cytosol	51.5	52.76
CDX82383	Canola	cytosol	51.5	52.76
CDY69106	Canola	cytosol	23.95	52.63
CDY67360	Canola	cytosol	20.96	52.24
AT3G17020.1	Thale cress	cytosol	50.3	51.53
KRH11952	Soybean	cytosol	49.1	50.0
EES18332	Sorghum	cytosol	49.1	49.4
EES03887	Sorghum	cytosol	46.71	49.37
EES02389	Sorghum	cytosol, plastid	46.71	49.37
CDY44517	Canola	cytosol	19.76	49.25
GSMUA_Achr8P06380_001	Banana	cytosol	18.56	47.69
EES05878	Sorghum	cytosol	46.11	46.67
CDX95890	Canola	cytosol	53.29	45.64
KXG21431	Sorghum	cytosol, mitochondrion, plastid	49.1	44.81
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	34.73	40.0
KXG31754	Sorghum	mitochondrion, plastid	16.77	10.94

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.2	EntrezGene:8079540	UniProt:C5Z0L4	EnsemblPlants:EES19072	ProteinID:EES19072
ProteinID:EES19072.1	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0008150
GO:GO:0009409	GO:GO:0009628	GO:GO:0016020	InterPro:IPR014729	PFAM:PF00582	PRINTS:PR01438
PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	InterPro:Rossmann-like_a/b/a_fold	EnsemblPlantsGene:SORBI_3009G052600	SUPFAM:SSF52402	unigene:Sbi.15096
UniParc:UPI0001A88CF9	InterPro:Universal_stress_UspA	InterPro:UspA	RefSeq:XP_002440642.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:5329668..5332584

Molecular Weight (calculated)

18070.8 Da

IEP (calculated)

5.263

GRAVY (calculated)

0.049

Length

167 amino acids

Sequence
(BLAST)

001: MAGAEGERWV GLATDFSEGS RAALRWAAAN LLRAGDHLLL LHVIKEPDYE QSEAILWEST GSPLIPLSEF SDPIIAKKYG AKPDIETLDI LNTTATQKEI
101: MVVVKVLWGD PREKLCQVIH DTPLSCLVIG SRGLGKLKRV LLGSVSDYVV NNATCPVTVV KSSSTEG

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.