Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0773200-01 | Rice | cytosol | 92.73 | 92.73 |
| Zm00001d018229_P001 | Maize | mitochondrion | 91.52 | 91.52 |
| TraesCS6D01G303600.1 | Wheat | cytosol | 89.09 | 89.09 |
| TraesCS6B01G354400.1 | Wheat | golgi | 89.09 | 89.09 |
| TraesCS6A01G323800.1 | Wheat | cytosol, mitochondrion, plastid | 89.09 | 89.09 |
| HORVU6Hr1G079150.1 | Barley | cytosol, mitochondrion, plastid | 87.88 | 87.88 |
| Bra032002.1-P | Field mustard | cytosol | 57.58 | 59.75 |
| CDY50688 | Canola | cytosol | 57.58 | 59.75 |
| CDY43136 | Canola | cytosol | 57.58 | 59.75 |
| GSMUA_Achr10P... | Banana | cytosol | 58.18 | 59.26 |
| PGSC0003DMT400060724 | Potato | cytosol | 54.55 | 55.56 |
| Solyc04g014600.2.1 | Tomato | nucleus | 54.55 | 55.56 |
| KRH17289 | Soybean | cytosol | 53.94 | 53.61 |
| VIT_04s0079g00610.t01 | Wine grape | cytosol | 52.73 | 53.05 |
| KRH72936 | Soybean | cytosol | 44.85 | 50.34 |
| EES18332 | Sorghum | cytosol | 50.3 | 50.0 |
| EES03887 | Sorghum | cytosol | 46.06 | 48.1 |
| EES19072 | Sorghum | cytosol | 46.67 | 46.11 |
| EES02389 | Sorghum | cytosol, plastid | 41.21 | 43.04 |
| AT3G03270.1 | Thale cress | cytosol | 50.3 | 41.29 |
| KXG21431 | Sorghum | cytosol, mitochondrion, plastid | 40.0 | 36.07 |
| KXG31754 | Sorghum | mitochondrion, plastid | 16.36 | 10.55 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:8075220 | UniProt:C5XTI4 | EnsemblPlants:EES05878 | ProteinID:EES05878 |
| ProteinID:EES05878.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0043621 | InterPro:IPR014729 | PFAM:PF00582 | PRINTS:PR01438 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF40 |
| InterPro:Rossmann-like_a/b/a_fold | EnsemblPlantsGene:SORBI_3004G314400 | SUPFAM:SSF52402 | UniParc:UPI0001A85A38 | InterPro:Universal_stress_UspA | InterPro:UspA |
| RefSeq:XP_002452902.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:65106284..65108439
Molecular Weight (calculated)
17794.7 Da
IEP (calculated)
9.178
GRAVY (calculated)
-0.067
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEKRTIGM GMDYSPSSKA AARWAVDNLL KAGDRIILVH VLPKGADASH KELWKSTGSP LIPLPEFMEM NVQARYGLNP DKEILEILQA ASKSKQVEVL
101: AKIYWGDARE KLCEAVDDLK VNSFVLGCRG LGPLKRALLG SVSNYVVNNA TCPVTVVRGP TGSSA
101: AKIYWGDARE KLCEAVDDLK VNSFVLGCRG LGPLKRALLG SVSNYVVNNA TCPVTVVRGP TGSSA
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
Arabidopsis Description
AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.