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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 5
  • cytosol 2
  • peroxisome 1
  • nucleus 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, peroxisome, plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008721_P001 Maize mitochondrion 89.24 89.24
TraesCS3B01G107200.1 Wheat mitochondrion 84.18 83.12
TraesCS3D01G091900.1 Wheat mitochondrion 84.18 83.12
TraesCS3A01G092000.1 Wheat mitochondrion 72.78 73.25
GSMUA_Achr2P22060_001 Banana cytosol 62.66 62.26
KXG21431 Sorghum cytosol, mitochondrion, plastid 66.46 57.38
EES19072 Sorghum cytosol 49.37 46.71
EES05878 Sorghum cytosol 43.04 41.21
EES03887 Sorghum cytosol 40.51 40.51
EES18332 Sorghum cytosol 38.61 36.75
KXG31754 Sorghum mitochondrion, plastid 17.09 10.55
Protein Annotations
EnsemblPlants:EES02389EnsemblPlantsGene:SORBI_3003G051600EntrezGene:8056552Gene3D:3.40.50.620GO:GO:0006950GO:GO:0008150
InterPro:IPR014729InterPro:Rossmann-like_a/b/a_foldInterPro:Universal_stress_UspAInterPro:UspAPANTHER:PTHR31964PANTHER:PTHR31964:SF54
PFAM:PF00582PRINTS:PR01438ProteinID:EES02389ProteinID:EES02389.1RefSeq:XP_002457269.1SUPFAM:SSF52402
unigene:Sbi.15252UniParc:UPI00016EF036UniProt:C5XNF8MapMan:35.2::
Description
hypothetical protein
Coordinates
chr3:-:4667295..4668993
Molecular Weight (calculated)
17196.7 Da
IEP (calculated)
8.055
GRAVY (calculated)
0.078
Length
158 amino acids
Sequence
(BLAST)
001: MAGRNIGVAV DFSSCSKAAL RWASTNLARN GDKLILIHVN NSYQNEQGAV HLWEQSGSPL IPLAEFSDVT RTYGVSPDKE TIEILTQVAN QRGIEVFAKI
101: FYGDPAKKLY EAVDLVSLSC MVIGSRGLST LKRALMGSVS TYIVNYAACP VTVVKEHM
Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)
001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
Arabidopsis Description
AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.