Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G091900.1 | Wheat | mitochondrion | 86.62 | 85.0 |
| TraesCS3B01G107200.1 | Wheat | mitochondrion | 85.35 | 83.75 |
| EES02389 | Sorghum | cytosol, plastid | 73.25 | 72.78 |
| Zm00001d008721_P001 | Maize | mitochondrion | 67.52 | 67.09 |
| GSMUA_Achr2P22060_001 | Banana | cytosol | 57.96 | 57.23 |
| TraesCS1A01G106600.1 | Wheat | peroxisome | 50.96 | 48.19 |
| TraesCS6A01G323800.1 | Wheat | cytosol, mitochondrion, plastid | 40.76 | 38.79 |
| TraesCS1A01G280700.1 | Wheat | cytosol | 39.49 | 37.35 |
| TraesCS3A01G092100.1 | Wheat | mitochondrion | 19.75 | 11.97 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G092000.1 | EnsemblPlantsGene:TraesCS3A01G092000 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 | InterPro:IPR014729 |
| InterPro:Rossmann-like_a/b/a_fold | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF54 | PFAM:PF00582 | SUPFAM:SSF52402 |
| TIGR:cd00293 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:57896894..57897900
Molecular Weight (calculated)
17037.6 Da
IEP (calculated)
7.966
GRAVY (calculated)
0.182
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRNIGVAV DFSSCSKAAL RWASTNLARS GDQLVLIHVN NSYQNEQGAM HLWEQSGSPL IPLVEFSDPH VTKKYGLSPD KETLEILAQV AHQSGVEVFG
101: KILYGDPTKK VCEAVDLVPL SCLVIGSRGL STLKRALGVF ARVCFVFSQI LYFIATP
101: KILYGDPTKK VCEAVDLVPL SCLVIGSRGL STLKRALGVF ARVCFVFSQI LYFIATP
001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
Arabidopsis Description
AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.