Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G107200.1 | Wheat | mitochondrion | 96.25 | 96.25 |
| TraesCS3A01G092000.1 | Wheat | mitochondrion | 85.0 | 86.62 |
| EES02389 | Sorghum | cytosol, plastid | 83.12 | 84.18 |
| Zm00001d008721_P001 | Maize | mitochondrion | 76.25 | 77.22 |
| GSMUA_Achr2P22060_001 | Banana | cytosol | 64.38 | 64.78 |
| TraesCS1D01G108300.1 | Wheat | peroxisome | 54.38 | 52.41 |
| TraesCS6D01G303600.1 | Wheat | cytosol | 43.75 | 42.42 |
| TraesCS1D01G279800.1 | Wheat | cytosol, golgi, unclear | 40.62 | 39.16 |
| TraesCS3D01G092000.1 | Wheat | mitochondrion | 19.38 | 12.25 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G091900.1 | EnsemblPlantsGene:TraesCS3D01G091900 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 | InterPro:IPR014729 |
| InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF54 | PFAM:PF00582 |
| PRINTS:PR01438 | SUPFAM:SSF52402 | TIGR:cd00293 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3D:-:46477572..46478550
Molecular Weight (calculated)
17271.9 Da
IEP (calculated)
7.503
GRAVY (calculated)
0.058
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRNIGVAV DFSSCSKAAL RWASTNLARS GDQLVLIHVN NSYQNEQGAM HLWEQSGSPL IPLVEFSDPH VTKKYGLLPD KETLEILAQV AHQSGVEVYG
101: KIFYGDPTKK VCEAVDLVPL SCLVIGSRGL STLKRALMGS VSTYVVNHAA CPVTVVKENM
101: KIFYGDPTKK VCEAVDLVPL SCLVIGSRGL STLKRALMGS VSTYVVNHAA CPVTVVKENM
001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
Arabidopsis Description
AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.