Factsheet for TraesCS1A01G106600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G108300.1	Wheat	peroxisome	97.59	97.59
Os05t0157200-01	Rice	cytosol, nucleus, plasma membrane, plastid	81.93	81.44
EES19072	Sorghum	cytosol	77.71	77.25
Zm00001d037573_P001	Maize	cytosol	77.11	76.65
HORVU1Hr1G023260.1	Barley	plastid	96.99	73.18
TraesCS1B01G124100.1	Wheat	cytosol	82.53	69.54
CDX92110	Canola	cytosol	57.23	58.28
Bra022190.1-P	Field mustard	cytosol	57.23	58.28
GSMUA_Achr11P...	Banana	cytosol	56.63	58.02
CDY34988	Canola	cytosol	56.63	57.67
CDY52729	Canola	cytosol	56.63	57.67
Bra021214.1-P	Field mustard	cytosol	56.63	57.67
CDX82383	Canola	cytosol	56.02	57.06
VIT_05s0077g01070.t01	Wine grape	cytosol	56.63	56.97
CDX75899	Canola	cytosol	55.42	56.44
Solyc01g059930.2.1	Tomato	cytosol, extracellular	54.82	55.83
Bra001649.1-P	Field mustard	cytosol	54.82	55.83
Bra038472.1-P	Field mustard	cytosol	25.3	55.26
PGSC0003DMT400056226	Potato	cytosol, extracellular	54.22	55.21
AT3G17020.1	Thale cress	cytosol	53.01	53.99
CDY69106	Canola	cytosol	24.7	53.95
CDY67360	Canola	cytosol	21.69	53.73
CDY44517	Canola	cytosol	21.08	52.24
Zm00001d011125_P001	Maize	extracellular	77.11	52.03
TraesCS1A01G280700.1	Wheat	cytosol	51.2	51.2
TraesCS3A01G092000.1	Wheat	mitochondrion	48.19	50.96
KRH11952	Soybean	cytosol	48.8	49.39
CDX95890	Canola	cytosol	57.23	48.72
TraesCS6A01G323800.1	Wheat	cytosol, mitochondrion, plastid	45.18	45.45
GSMUA_Achr8P06380_001	Banana	cytosol	16.87	43.08
KRH36979	Soybean	endoplasmic reticulum, extracellular, vacuole	34.94	40.0
TraesCS3A01G092100.1	Wheat	mitochondrion	19.28	12.36

Protein Annotations

EnsemblPlants:TraesCS1A01G106600.1	EnsemblPlantsGene:TraesCS1A01G106600	Gene3D:3.40.50.620	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006950	GO:GO:0008150	GO:GO:0009409	GO:GO:0009628	GO:GO:0016020	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF65	PFAM:PF00582
PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2	:

Description

No Description!

Coordinates

chr1A:+:104377811..104379455

Molecular Weight (calculated)

17865.4 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.052

Length

166 amino acids

Sequence
(BLAST)

001: MAADGERWVG LAVDFSEGSR AALQWAADNL LRSGDNLLLL HVLKDPDYEQ GETLLWEASG SPLIPLSEFS HPSTAKKYGV KPDAETLDML NTIAKQKEVS
101: VVSKVLFGDP REKLCQAIHD MPISSLVIGS RGLGKLKRVL LGSVSDYVVN NAACPVTVVK PASNHA

Best Arabidopsis Sequence Match ( AT3G17020.1 )
(BLAST)

001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI

Arabidopsis Description

AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.