Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX92110 | Canola | cytosol | 81.03 | 96.93 |
CDY52729 | Canola | cytosol | 77.44 | 92.64 |
CDY34988 | Canola | cytosol | 76.92 | 92.02 |
CDX75899 | Canola | cytosol | 75.38 | 90.18 |
CDX82383 | Canola | cytosol | 75.38 | 90.18 |
CDY69106 | Canola | cytosol | 33.33 | 85.53 |
AT3G17020.1 | Thale cress | cytosol | 71.28 | 85.28 |
CDY67360 | Canola | cytosol | 29.23 | 85.07 |
CDY44517 | Canola | cytosol | 28.72 | 83.58 |
VIT_05s0077g01070.t01 | Wine grape | cytosol | 58.46 | 69.09 |
Solyc01g059930.2.1 | Tomato | cytosol, extracellular | 55.9 | 66.87 |
PGSC0003DMT400056226 | Potato | cytosol, extracellular | 55.9 | 66.87 |
KRH11952 | Soybean | cytosol | 53.85 | 64.02 |
GSMUA_Achr11P... | Banana | cytosol | 51.28 | 61.73 |
TraesCS1D01G108300.1 | Wheat | peroxisome | 49.23 | 57.83 |
TraesCS1A01G106600.1 | Wheat | peroxisome | 48.72 | 57.23 |
Os05t0157200-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 47.18 | 55.09 |
Zm00001d037573_P001 | Maize | cytosol | 45.64 | 53.29 |
EES19072 | Sorghum | cytosol | 45.64 | 53.29 |
KRH36979 | Soybean | endoplasmic reticulum, extracellular, vacuole | 36.92 | 49.66 |
CDY50688 | Canola | cytosol | 37.44 | 45.91 |
CDY43136 | Canola | cytosol | 36.92 | 45.28 |
CDX73512 | Canola | cytosol | 36.41 | 45.22 |
HORVU1Hr1G023260.1 | Barley | plastid | 49.74 | 44.09 |
TraesCS1B01G124100.1 | Wheat | cytosol | 43.59 | 43.15 |
GSMUA_Achr8P06380_001 | Banana | cytosol | 14.36 | 43.08 |
CDX67580 | Canola | cytosol | 34.87 | 42.77 |
CDY07565 | Canola | cytosol | 34.36 | 42.14 |
CDY13163 | Canola | cytosol | 34.36 | 41.36 |
CDX76180 | Canola | cytosol | 34.36 | 41.36 |
Zm00001d011125_P001 | Maize | extracellular | 46.67 | 36.99 |
CDY54033 | Canola | cytosol | 17.95 | 36.08 |
CDY54032 | Canola | plastid | 5.64 | 32.35 |
Protein Annotations
EnsemblPlants:CDX95890 | EnsemblPlantsGene:GSBRNA2T00101880001 | Gene3D:3.40.50.620 | GO:A0A078E260 | GO:GO:0006950 | GO:GO:0008150 |
InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF65 |
PFAM:PF00582 | PRINTS:PR01438 | ProteinID:CDX95890 | ProteinID:CDX95890.1 | SEG:seg | SUPFAM:SSF52402 |
UniParc:UPI0004EF482B | MapMan:35.2 | : | : | : | : |
Description
BnaC05g36410D
Coordinates
chrLK031891:+:1107774..1109774
Molecular Weight (calculated)
21671.5 Da
IEP (calculated)
9.163
GRAVY (calculated)
-0.191
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MITKKEQNLT RERIKLSLKK VVLVRRERER ERMADSGGRR IGVAVDFSEC SKKALNWAID NVVRDGDYLI LITVAPNMNY EEGEMQLWET VGSPLIPLSE
101: VSEASVMKKY GVKPDAETLD IANTAATQKS ITVVMKIYWG DPREKLCEAA EHIPLSSIVI GNRGLGGLKR MIMGSVSNHV VNNVACPVTV VKAHH
101: VSEASVMKKY GVKPDAETLD IANTAATQKS ITVVMKIYWG DPREKLCEAA EHIPLSSIVI GNRGLGGLKR MIMGSVSNHV VNNVACPVTV VKAHH
001: MGKARTVGVG MDYSPTSKLA LRWAAENLLE DGDTVILIHV QPQNADHTRK ILFEETGSPL IPLEEFREVN LSKQYGLAYD PEVLDVLDTL SRAKKVKVVA
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
101: KVYWGDPREK LCDAVENLKL DSIVLGSRGL GSLKRILLGS VSNHVVTNAT CPVTVVKAN
Arabidopsis Description
AT3G03270 protein [Source:UniProtKB/TrEMBL;Acc:Q8LFK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.