Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022190.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY52729 | Canola | cytosol | 94.48 | 94.48 |
| CDY34988 | Canola | cytosol | 93.86 | 93.86 |
| CDX75899 | Canola | cytosol | 93.25 | 93.25 |
| CDX82383 | Canola | cytosol | 93.25 | 93.25 |
| CDY67360 | Canola | cytosol | 37.42 | 91.04 |
| CDY69106 | Canola | cytosol | 42.33 | 90.79 |
| CDY44517 | Canola | cytosol | 36.81 | 89.55 |
| AT3G17020.1 | Thale cress | cytosol | 87.12 | 87.12 |
| CDX95890 | Canola | cytosol | 96.93 | 81.03 |
| VIT_05s0077g01070.t01 | Wine grape | cytosol | 71.78 | 70.91 |
| Solyc01g059930.2.1 | Tomato | cytosol, extracellular | 68.1 | 68.1 |
| PGSC0003DMT400056226 | Potato | cytosol, extracellular | 68.1 | 68.1 |
| KRH11952 | Soybean | cytosol | 64.42 | 64.02 |
| GSMUA_Achr11P... | Banana | cytosol | 63.19 | 63.58 |
| TraesCS1D01G108300.1 | Wheat | peroxisome | 58.9 | 57.83 |
| TraesCS1A01G106600.1 | Wheat | peroxisome | 58.28 | 57.23 |
| Os05t0157200-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 57.06 | 55.69 |
| Zm00001d037573_P001 | Maize | cytosol | 53.99 | 52.69 |
| EES19072 | Sorghum | cytosol | 53.99 | 52.69 |
| KRH36979 | Soybean | endoplasmic reticulum, extracellular, vacuole | 43.56 | 48.97 |
| GSMUA_Achr8P06380_001 | Banana | cytosol | 19.02 | 47.69 |
| CDY50688 | Canola | cytosol | 44.79 | 45.91 |
| CDY43136 | Canola | cytosol | 44.17 | 45.28 |
| CDX73512 | Canola | cytosol | 43.56 | 45.22 |
| HORVU1Hr1G023260.1 | Barley | plastid | 58.28 | 43.18 |
| TraesCS1B01G124100.1 | Wheat | cytosol | 52.15 | 43.15 |
| CDX67580 | Canola | cytosol | 41.72 | 42.77 |
| CDY07565 | Canola | cytosol | 41.1 | 42.14 |
| CDX76180 | Canola | cytosol | 41.1 | 41.36 |
| CDY13163 | Canola | cytosol | 41.1 | 41.36 |
| CDY54033 | Canola | cytosol | 22.09 | 37.11 |
| Zm00001d011125_P001 | Maize | extracellular | 52.76 | 34.96 |
| CDY54032 | Canola | plastid | 6.75 | 32.35 |
Protein Annotations
| EnsemblPlants:CDX92110 | EnsemblPlantsGene:GSBRNA2T00153799001 | Gene3D:3.40.50.620 | GO:A0A078DS53 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF65 |
| PFAM:PF00582 | PRINTS:PR01438 | ProteinID:CDX92110 | ProteinID:CDX92110.1 | SEG:seg | SUPFAM:SSF52402 |
| UniParc:UPI0002547627 | MapMan:35.2 | : | : | : | : |
Description
BnaA05g22970D
Coordinates
chrLK031871:-:235893..237112
Molecular Weight (calculated)
17749.6 Da
IEP (calculated)
6.511
GRAVY (calculated)
0.002
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESGGRRIG VAVDFSECSK KALNWAIDNV VRDGDYLILI TVAPNMNYEE GEMQLWETVG SPLIPLSEVS EASVMKKYGV KPDAETLDIA NTAARQKSIT
101: VVMKIYWGDP REKICEAVEH IPLSSLVIGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHH
101: VVMKIYWGDP REKICEAVEH IPLSSLVIGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHH
001: MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
101: VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN NVACPVTVVK AHI
Arabidopsis Description
AT3g17020/K14A17_14 [Source:UniProtKB/TrEMBL;Acc:Q9LSP5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.