Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g01430.t01 | Wine grape | cytosol | 67.68 | 67.68 |
| KRH29731 | Soybean | endoplasmic reticulum | 64.63 | 64.63 |
| KRH24723 | Soybean | nucleus | 63.41 | 63.41 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.17 | 59.85 |
| GSMUA_Achr6P23610_001 | Banana | cytosol | 56.1 | 57.5 |
| EES03887 | Sorghum | cytosol | 53.05 | 55.06 |
| EES18332 | Sorghum | cytosol | 54.88 | 54.22 |
| Os01t0849600-01 | Rice | cytosol, plastid | 53.05 | 53.7 |
| GSMUA_Achr9P03740_001 | Banana | cytosol | 53.66 | 53.33 |
| VIT_04s0079g00610.t01 | Wine grape | cytosol | 53.05 | 53.05 |
| TraesCS1B01G289700.1 | Wheat | cytosol | 51.22 | 50.6 |
| TraesCS1D01G279800.1 | Wheat | cytosol, golgi, unclear | 51.22 | 50.6 |
| GSMUA_Achr3P17670_001 | Banana | mitochondrion | 56.71 | 50.27 |
| TraesCS1A01G280700.1 | Wheat | cytosol | 50.0 | 49.4 |
| Zm00001d012382_P002 | Maize | cytosol | 52.44 | 45.03 |
| Os05t0453700-01 | Rice | cytosol | 48.78 | 42.33 |
| VIT_05s0077g01070.t01 | Wine grape | cytosol | 42.07 | 41.82 |
| HORVU3Hr1G085660.9 | Barley | cytosol | 47.56 | 40.41 |
| Zm00001d038351_P004 | Maize | cytosol | 47.56 | 32.64 |
Protein Annotations
| EntrezGene:100257097 | wikigene:100257097 | Gene3D:3.40.50.620 | MapMan:35.2 | ProteinID:CBI16038 | ProteinID:CBI16038.3 |
| UniProt:D7SK62 | EMBL:FN594951 | GO:GO:0006950 | GO:GO:0008150 | InterPro:IPR014729 | EntrezGene:LOC100257097 |
| wikigene:LOC100257097 | PFAM:PF00582 | PRINTS:PR01438 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF23 | InterPro:Rossmann-like_a/b/a_fold |
| SUPFAM:SSF52402 | TIGR:TC57345 | TIGR:TC63516 | UniParc:UPI00015C7EDC | InterPro:Universal_stress_UspA | InterPro:UspA |
| ArrayExpress:VIT_06s0004g05730 | EnsemblPlantsGene:VIT_06s0004g05730 | EnsemblPlants:VIT_06s0004g05730.t01 | unigene:Vvi.24640 | unigene:Vvi.698 | RefSeq:XP_002281607 |
| RefSeq:XP_002281607.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:6499605..6500690
Molecular Weight (calculated)
18015.7 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.048
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDRKIGVA VDFSQGSNIA LKWAIDNLLD KGDTLFFIHV KPSQGDESRN LLWSATGSPL IPLEEFRDLD VAQKYEINLD PEFLGMLATA SSQKKAKIIA
101: KIYWGDARDK LCDAVAELKL DSLVMGSRGL GTIQRTFLGS VTNYVMVHAT CPVTIVKDPS SHGF
101: KIYWGDARDK LCDAVAELKL DSLVMGSRGL GTIQRTFLGS VTNYVMVHAT CPVTIVKDPS SHGF
001: MPKDRNIGIA MDFSESSKNA LKWAIENLAD KGDTIYIIHT LPLSGDESRN SLWFKSGSPL IPLAEFREPE IMEKYGVKTD IACLDMLDTG SRQKEVHVVT
101: KLYWGDAREK LVDAVKDLKL DSIVMGSRGL SALQRIIMGS VSSFVIQHAP CPVTVVKDNE
101: KLYWGDAREK LVDAVKDLKL DSIVMGSRGL SALQRIIMGS VSSFVIQHAP CPVTVVKDNE
Arabidopsis Description
AT3G53990 protein [Source:UniProtKB/TrEMBL;Acc:Q9M328]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.