Factsheet for Bra041036.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80079	Canola	cytosol	100.0	100.0
CDY37784	Canola	cytosol	99.49	99.49
Bra036311.1-P	Field mustard	cytosol	85.42	91.51
Bra000914.1-P	Field mustard	cytosol	91.82	91.35
Bra021241.1-P	Field mustard	cytosol	91.56	91.09
EES17665	Sorghum	cytosol	92.07	90.91
GSMUA_Achr3P12780_001	Banana	cytosol	91.56	90.86
AT3G17390.1	Thale cress	cytosol	91.3	90.84
Os05t0135700-01	Rice	cytosol	91.82	90.66
GSMUA_Achr8P06200_001	Banana	cytosol	90.79	90.33
Bra001661.1-P	Field mustard	cytosol	90.54	90.08
GSMUA_Achr1P15960_001	Banana	cytosol	90.54	89.85
EES02825	Sorghum	cytosol	90.79	89.65
HORVU6Hr1G034650.1	Barley	plasma membrane	90.28	89.14
Os01t0293000-01	Rice	cytosol	90.28	89.14
Bra023084.1-P	Field mustard	cytosol	88.75	88.97
Bra017219.1-P	Field mustard	cytosol	88.75	88.97
TraesCS6A01G169300.1	Wheat	cytosol	90.03	88.89
TraesCS6B01G197300.1	Wheat	cytosol	90.03	88.89
TraesCS6D01G159100.1	Wheat	plastid	90.03	88.89
Bra005236.1-P	Field mustard	cytosol	84.65	88.74
GSMUA_Achr1P18400_001	Banana	cytosol	32.48	86.39

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	EnsemblPlantsGene:Bra041036	EnsemblPlants:Bra041036.1
EnsemblPlants:Bra041036.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478	GO:GO:0005488
GO:GO:0005524	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	UniProt:M4FIV7	HAMAP:MF_00086	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF21	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniParc:UPI000253EC22	SEG:seg	:	:

Description

AT1G02500 (E=5e-207) SAM1, SAM-1, MAT1 | SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1); methionine adenosyltransferase

Coordinates

chrScaffold000403:+:6688..7863

Molecular Weight (calculated)

42697.8 Da

IEP (calculated)

5.779

GRAVY (calculated)

-0.299

Length

391 amino acids

Sequence
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQVSDAVLDA CLEQDPESKV ACETCTKTNM VMVFGEITTK AKVDYEKIVR DTCRAIGFVS ADVGLDADTC KVLVNIEEQS
101: PDIAQGVHGH FTKRPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CPWVRPDGKT QVTVEYYNEN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP AKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPSKVDR SGAYIARQAA KSIVASDLAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGKIPD KEILKIVKEN FDFRPGMMTI NLDLTRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKAEK A

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.