Factsheet for GSMUA_Achr3P12780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15960_001	Banana	cytosol	96.45	96.45
GSMUA_Achr8P06200_001	Banana	cytosol	94.92	95.17
GSMUA_Achr3P08470_001	Banana	cytosol	94.92	94.44
GSMUA_Achr7P02130_001	Banana	cytosol	94.42	93.94
GSMUA_Achr2P07970_001	Banana	cytosol	94.16	93.69
GSMUA_Achr1P12930_001	Banana	cytosol	94.16	93.69
GSMUA_Achr5P20990_001	Banana	cytosol	93.65	93.18
KRH12731	Soybean	endoplasmic reticulum	93.4	93.16
KRH02439	Soybean	nucleus	92.39	92.86
EES17665	Sorghum	cytosol	93.15	92.68
KRH50640	Soybean	endoplasmic reticulum	92.13	92.6
Os05t0135700-01	Rice	cytosol	92.89	92.42
KRG96585	Soybean	cytosol, endoplasmic reticulum, nucleus	92.39	92.39
KRH02438	Soybean	endoplasmic reticulum, nucleus	91.88	92.35
Zm00001d024754_P001	Maize	plasma membrane	92.89	92.19
EES02825	Sorghum	cytosol	92.64	92.17
KRH68318	Soybean	endoplasmic reticulum	92.13	92.13
AT1G02500.1	Thale cress	cytosol	91.88	92.11
PGSC0003DMT400047146	Potato	cytosol	91.88	92.11
PGSC0003DMT400011943	Potato	cytosol	91.88	92.11
GSMUA_Achr1P18400_001	Banana	cytosol	34.26	91.84
HORVU6Hr1G034650.1	Barley	plasma membrane	92.13	91.67
CDX80079	Canola	cytosol	90.86	91.56
Bra041036.1-P	Field mustard	cytosol	90.86	91.56
CDY72092	Canola	cytosol	84.77	91.51
CDY22010	Canola	cytosol	84.77	91.51
VIT_14s0060g00480.t01	Wine grape	cytosol	92.64	91.48
TraesCS6D01G159100.1	Wheat	plastid	91.88	91.41
TraesCS6B01G197300.1	Wheat	cytosol	91.88	91.41
TraesCS6A01G169300.1	Wheat	cytosol	91.88	91.41
Os01t0293000-01	Rice	cytosol	91.88	91.41
CDX82370	Canola	cytosol	91.12	91.35
KRH33763	Soybean	endoplasmic reticulum	90.1	91.26
Bra036311.1-P	Field mustard	cytosol	84.52	91.23
CDX74394	Canola	cytosol	84.52	91.23
AT4G01850.1	Thale cress	cytosol	90.86	91.09
CDY37784	Canola	cytosol	90.36	91.05
Bra021241.1-P	Field mustard	cytosol	90.61	90.84
CDY63017	Canola	cytosol	90.61	90.84
Bra000914.1-P	Field mustard	cytosol	90.36	90.59
Bra001661.1-P	Field mustard	cytosol	90.1	90.33
AT3G17390.1	Thale cress	cytosol	90.1	90.33
CDY48693	Canola	cytosol	89.34	89.57
VIT_07s0005g02230.t01	Wine grape	cytosol	93.4	88.25
VIT_06s0061g00500.t01	Wine grape	cytosol	87.31	87.98
PGSC0003DMT400087679	Potato	cytosol	86.8	87.69
AT2G36880.1	Thale cress	cytosol	86.8	87.69
PGSC0003DMT400072701	Potato	cytosol	86.55	87.44
Bra023084.1-P	Field mustard	cytosol	86.55	87.44
VIT_05s0020g00670.t01	Wine grape	cytosol	93.4	87.41
CDY46742	Canola	cytosol	82.99	87.2
CDX75007	Canola	cytosol	82.49	87.13
CDY33203	Canola	cytosol	82.49	87.13
CDX79695	Canola	cytosol	82.74	86.93
Bra017219.1-P	Field mustard	cytosol	86.04	86.92
Bra005236.1-P	Field mustard	cytosol	81.98	86.6
GSMUA_Achr5P26120_001	Banana	cytosol	85.79	86.44
KRH32501	Soybean	cytosol	85.53	86.41
KRH19887	Soybean	endoplasmic reticulum	85.53	86.41
GSMUA_Achr11P...	Banana	cytosol	85.28	86.38
KRH67734	Soybean	endoplasmic reticulum	85.03	85.9
CDX91837	Canola	cytosol	76.9	83.24
KRH69160	Soybean	cytosol	42.13	79.43
Zm00001d010920_P001	Maize	plasma membrane	93.15	77.92
CDX75914	Canola	cytosol, mitochondrion	91.12	76.71
KRG96026	Soybean	cytosol	12.69	74.63
Solyc04g049200.1.1	Tomato	cytosol	17.26	70.83
VIT_08s0007g05000.t01	Wine grape	cytosol	78.93	69.89
VIT_03s0017g00080.t01	Wine grape	cytosol	9.64	51.35

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr3G12780_001	EnsemblPlants:GSMUA_Achr3P12780_001	EnsemblPlants:GSMUA_Achr3T12780_001	UniProt:M0SE45	HAMAP:MF_00086	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF16	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniParc:UPI000294ECAB	SEG:seg	:	:

Description

S-adenosylmethionine synthase [Source:GMGC_GENE;Acc:GSMUA_Achr3G12780_001]

Coordinates

chr3:+:9464445..9465884

Molecular Weight (calculated)

43198.3 Da

IEP (calculated)

5.437

GRAVY (calculated)

-0.342

Length

394 amino acids

Sequence
(BLAST)

001: MEDTFLFTSE SVNEGHPDKL CDQISDAVLD ACLEQDPDSK VACETCTKTN MVMVFGEITT KGNIDYEKIV RDTCRAIGFT SDDVGLDADR CKVLVNIEQQ
101: SPDIAQGVHG HFTKRPEEIG AGDQGHMFGY ATDETPELMP LSHVLATKLG ARLTDVRKNG TCPWLRPDGK TQVTVEYRNE HGAMVPIRVH TVLISTQHDE
201: TVTNDEIAAD LKEHVIKAVV PEQYLDEKTI FHLNPSGRFV IGGPHGDAGL TGRKIIIDTY GGWGAHGGGA FSGKDPTKVD RSGAYIARQA AKSIVANGLA
301: RRCIVQISYA IGVPEPLSVF VDTYGTGKIP DKEILEIVKE NFDFRPGMIT INLDLKRGGN GRFLKTAAYG HFGRDDPDFT WEVVKPLKWE KPAA

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.