CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74394	Canola	cytosol	91.48	91.23
CDY72092	Canola	cytosol	91.21	90.96
CDY22010	Canola	cytosol	91.21	90.96
Bra000914.1-P	Field mustard	cytosol	91.48	84.73
AT4G01850.1	Thale cress	cytosol	90.38	83.72
CDX80079	Canola	cytosol	84.34	78.52
CDY37784	Canola	cytosol	84.34	78.52
CDX82370	Canola	cytosol	84.34	78.12
GSMUA_Achr1P15960_001	Banana	cytosol	83.52	77.16
GSMUA_Achr3P12780_001	Banana	cytosol	83.24	76.9
CDY63017	Canola	cytosol	82.97	76.84
EES17665	Sorghum	cytosol	83.24	76.52
HORVU6Hr1G034650.1	Barley	plasma membrane	83.24	76.52
CDY46742	Canola	cytosol	78.57	76.27
EES02825	Sorghum	cytosol	82.97	76.26
TraesCS6A01G169300.1	Wheat	cytosol	82.97	76.26
TraesCS6B01G197300.1	Wheat	cytosol	82.97	76.26
TraesCS6D01G159100.1	Wheat	plastid	82.97	76.26
CDY48693	Canola	cytosol	82.14	76.08
GSMUA_Achr8P06200_001	Banana	cytosol	82.14	76.08
CDX79695	Canola	cytosol	78.3	76.0
CDY33203	Canola	cytosol	77.75	75.87
CDX75007	Canola	cytosol	77.75	75.87
Os01t0293000-01	Rice	cytosol	82.42	75.76
Os05t0135700-01	Rice	cytosol	82.14	75.51
CDX75914	Canola	cytosol, mitochondrion	84.34	65.6
GSMUA_Achr1P18400_001	Banana	cytosol	20.6	51.02

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	GO:A0A078DSF2	InterPro:ADOMET_SYNTHASE_CS	EnsemblPlants:CDX91837
ProteinID:CDX91837	ProteinID:CDX91837.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478
GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00153446001	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773
PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF21	MetaCyc:PWY-5041
MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	TMHMM:TMhelix	UniPathway:UPA00315	UniParc:UPI0004EDCB07	SEG:seg	:

Description

BnaC03g31390D

Coordinates

chrLK031870:+:229545..231792

Molecular Weight (calculated)

39798.7 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.153

Length

364 amino acids

Sequence
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA KLTEVRKNGT CRWLRPDGKT QVTVEYYKDN GAMVPVRVHT VLISTQHDET
201: VTNEEIARRF VIGGPHGDAG LTGRKIIIDT YGGWGAHGGG AFSGKDPTKV DRSGAYIVRQ AAKSVVANGM ARRALVQVSY AIGVPEPLSV FVDTYGTGLI
301: PDKEILKIVK ESFDFRPGMM TINLDLKRGG NGSHSSGTNL RLKILIITIM IFSIFYACFY PLHF

Best Arabidopsis Sequence Match ( AT1G02500.1 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.