CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46742	Canola	cytosol	99.47	99.47
CDY33203	Canola	cytosol	98.4	98.93
CDX75007	Canola	cytosol	98.13	98.66
Bra023084.1-P	Field mustard	cytosol	99.47	95.64
AT2G36880.1	Thale cress	cytosol	98.4	94.62
PGSC0003DMT400087679	Potato	cytosol	94.13	90.51
Solyc09g008280.1.1	Tomato	nucleus	93.87	90.26
PGSC0003DMT400072701	Potato	cytosol	93.6	90.0
Solyc10g083970.1.1	Tomato	nucleus, unclear	93.33	89.74
KRH19887	Soybean	endoplasmic reticulum	92.53	88.97
KRH32501	Soybean	cytosol	91.73	88.21
KRH67734	Soybean	endoplasmic reticulum	91.2	87.69
VIT_06s0061g00500.t01	Wine grape	cytosol	91.2	87.47
CDY63017	Canola	cytosol	90.93	86.77
CDX82370	Canola	cytosol	90.4	86.26
CDY48693	Canola	cytosol	89.87	85.75
CDY37784	Canola	cytosol	89.07	85.42
CDX80079	Canola	cytosol	89.07	85.42
CDY72092	Canola	cytosol	82.4	84.66
CDY22010	Canola	cytosol	82.4	84.66
CDX74394	Canola	cytosol	82.13	84.38
EES17665	Sorghum	cytosol	88.8	84.09
Os05t0135700-01	Rice	cytosol	87.47	82.83
GSMUA_Achr3P12780_001	Banana	cytosol	86.93	82.74
GSMUA_Achr1P15960_001	Banana	cytosol	86.93	82.74
HORVU6Hr1G034650.1	Barley	plasma membrane	87.2	82.58
TraesCS6D01G159100.1	Wheat	plastid	87.2	82.58
TraesCS6A01G169300.1	Wheat	cytosol	87.2	82.58
TraesCS6B01G197300.1	Wheat	cytosol	87.2	82.58
GSMUA_Achr8P06200_001	Banana	cytosol	86.4	82.44
Os01t0293000-01	Rice	cytosol	86.93	82.32
EES02825	Sorghum	cytosol	86.4	81.82
GSMUA_Achr1P18400_001	Banana	cytosol	31.2	79.59
CDX91837	Canola	cytosol	76.0	78.3
CDX75914	Canola	cytosol, mitochondrion	90.4	72.44
VIT_08s0007g05000.t01	Wine grape	cytosol	82.67	69.66

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	GO:A0A078CS94	InterPro:ADOMET_SYNTHASE_CS	EnsemblPlants:CDX79695
ProteinID:CDX79695	ProteinID:CDX79695.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478
GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00132500001	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF36	MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central
InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniPathway:UPA00315	UniParc:UPI0004EE7BA7
SEG:seg	:	:	:	:	:

Description

BnaC03g20310D

Coordinates

chrLK031818:-:1695254..1697045

Molecular Weight (calculated)

40749.7 Da

IEP (calculated)

5.418

GRAVY (calculated)

-0.194

Length

375 amino acids

Sequence
(BLAST)

001: METFLFTSES VNEGHPDKLC DQVSDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTS AKVDYEKIVR STCREIGFVS ADVGLDADKC NVLVNIEQQS
101: PDIAQGVHGH LTKKPEDIGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTETQVTVE YKNDGGAMIP IRVHTVLIST QHDETVTNDE IAADLKEHVI
201: KPVIPAKYLD ENTIFHLNPS GRFVIGGPHG DAGLTGRKII IDTYGGWGAH GGGAFSGKDP TKVDRSGAYI VRQAAKSVVA AGLARRCIVQ VSYAIGVPEP
301: LSVFVDTYKT GTIPDKDILV LIKEAFDFRP GMMAINLDLK RGGNFRFQKT AAYGHFGRED PDFTWEVIKP LKPKA

Best Arabidopsis Sequence Match ( AT2G36880.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTA AKVDYEKIVR STCREIGFIS ADVGLDADKC NVLVNIEQQS
101: PDIAQGVHGH LTKKPEDIGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNKT CPWLRPDGKT QVTVEYKNDG GAMIPIRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP AKYLDDNTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVAAGLAR
301: RCIVQVSYAI GVPEPLSVFV DTYKTGTIPD KDILVLIKEA FDFRPGMMAI NLDLKRGGNF RFQKTAAYGH FGRDDPDFTW EVVKPLKPKA

Arabidopsis Description

METK3S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VXF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.