CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021241.1-P	Field mustard	cytosol	98.73	98.73
CDY63017	Canola	cytosol	98.73	98.73
CDX82370	Canola	cytosol	97.2	97.2
AT3G17390.1	Thale cress	cytosol	96.69	96.69
CDX75007	Canola	cytosol	86.26	90.88
CDY33203	Canola	cytosol	86.26	90.88
CDX80079	Canola	cytosol	89.82	90.28
CDX79695	Canola	cytosol	85.75	89.87
CDY46742	Canola	cytosol	85.75	89.87
CDY72092	Canola	cytosol	83.46	89.86
CDY22010	Canola	cytosol	83.46	89.86
CDY37784	Canola	cytosol	89.31	89.77
EES17665	Sorghum	cytosol	90.33	89.65
CDX74394	Canola	cytosol	83.21	89.59
Os05t0135700-01	Rice	cytosol	90.08	89.39
GSMUA_Achr3P12780_001	Banana	cytosol	89.57	89.34
HORVU6Hr1G034650.1	Barley	plasma membrane	89.82	89.14
TraesCS6D01G159100.1	Wheat	plastid	89.31	88.64
TraesCS6B01G197300.1	Wheat	cytosol	89.31	88.64
TraesCS6A01G169300.1	Wheat	cytosol	89.31	88.64
GSMUA_Achr1P15960_001	Banana	cytosol	88.55	88.32
GSMUA_Achr8P06200_001	Banana	cytosol	88.3	88.3
Os01t0293000-01	Rice	cytosol	88.55	87.88
EES02825	Sorghum	cytosol	88.55	87.88
GSMUA_Achr1P18400_001	Banana	cytosol	32.06	85.71
CDX91837	Canola	cytosol	76.08	82.14
CDX75914	Canola	cytosol, mitochondrion	97.2	81.62

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	GO:A0A078IHT6	UniProt:A0A078IHT6	InterPro:ADOMET_SYNTHASE_CS
EnsemblPlants:CDY48693	ProteinID:CDY48693	ProteinID:CDY48693.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00091578001
HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376
ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF35	MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C
InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034
UniPathway:UPA00315	UniParc:UPI0004EDD3DB	SEG:seg	:	:	:

Description

BnaCnng16700DS-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078IHT6]

Coordinates

chrLK032787:-:10461..12188

Molecular Weight (calculated)

42586.7 Da

IEP (calculated)

5.294

GRAVY (calculated)

-0.213

Length

393 amino acids

Sequence
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEKIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL SHVLATKLGA KLTEVRKNGT CAWLRPDGPA LVTVEYLNEG GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVITPVIP EKYLDDNTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RCIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Best Arabidopsis Sequence Match ( AT3G17390.1 )
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEQIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTIEYINES GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RVIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Arabidopsis Description

METK4S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.