CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75007	Canola	cytosol	99.73	99.73
CDY46742	Canola	cytosol	99.46	98.93
CDX79695	Canola	cytosol	98.93	98.4
AT2G36880.1	Thale cress	cytosol	99.46	95.13
PGSC0003DMT400087679	Potato	cytosol	94.64	90.51
PGSC0003DMT400072701	Potato	cytosol	94.37	90.26
Solyc10g083970.1.1	Tomato	nucleus, unclear	94.1	90.0
Solyc09g008280.1.1	Tomato	nucleus	93.83	89.74
KRH19887	Soybean	endoplasmic reticulum	93.03	88.97
KRH32501	Soybean	cytosol	92.23	88.21
VIT_06s0061g00500.t01	Wine grape	cytosol	91.69	87.47
KRH67734	Soybean	endoplasmic reticulum	91.15	87.18
CDY48693	Canola	cytosol	90.88	86.26
CDY63017	Canola	cytosol	90.88	86.26
CDX82370	Canola	cytosol	90.88	86.26
CDY72092	Canola	cytosol	83.11	84.93
CDY22010	Canola	cytosol	83.11	84.93
CDX80079	Canola	cytosol	89.01	84.91
CDX74394	Canola	cytosol	82.84	84.66
CDY37784	Canola	cytosol	88.47	84.4
EES17665	Sorghum	cytosol	88.74	83.59
GSMUA_Achr1P15960_001	Banana	cytosol	87.13	82.49
GSMUA_Achr3P12780_001	Banana	cytosol	87.13	82.49
Os05t0135700-01	Rice	cytosol	87.4	82.32
GSMUA_Achr8P06200_001	Banana	cytosol	86.6	82.19
HORVU6Hr1G034650.1	Barley	plasma membrane	87.13	82.07
TraesCS6D01G159100.1	Wheat	plastid	86.6	81.57
TraesCS6A01G169300.1	Wheat	cytosol	86.6	81.57
TraesCS6B01G197300.1	Wheat	cytosol	86.6	81.57
Os01t0293000-01	Rice	cytosol	86.33	81.31
EES02825	Sorghum	cytosol	86.33	81.31
GSMUA_Achr1P18400_001	Banana	cytosol	31.64	80.27
CDX91837	Canola	cytosol	75.87	77.75
CDX75914	Canola	cytosol, mitochondrion	90.88	72.44
VIT_08s0007g05000.t01	Wine grape	cytosol	82.84	69.44

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	GO:A0A078H8M7	UniProt:A0A078H8M7	InterPro:ADOMET_SYNTHASE_CS
EnsemblPlants:CDY33203	ProteinID:CDY33203	ProteinID:CDY33203.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00053936001
PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377
PANTHER:PTHR11964	PANTHER:PTHR11964:SF36	MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N
InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniPathway:UPA00315
UniParc:UPI0004EE65CE	SEG:seg	:	:	:	:

Description

BnaC04g08360DS-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078H8M7]

Coordinates

chrLK032308:-:336267..338295

Molecular Weight (calculated)

40492.3 Da

IEP (calculated)

5.413

GRAVY (calculated)

-0.184

Length

373 amino acids

Sequence
(BLAST)

001: METFLFTSES VNEGHPDKLC DQVSDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTS AKVDYEKIVR STCREIGFIS ADVGLDADKC NVLVNIEQQS
101: PDIAQGVHGH LTKKPEDIGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVTVEYK NDGGAMIPIR VHTVLISTQH DETVTNDEIA ADLKEHVIKP
201: VIPAKYLDDN TIFHLNPSGR FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYIVR QAAKSVVAAG LARRCIVQVS YAIGVPEPLS
301: VFVDTYKTGT IPDKDILVLI KEAFDFRPGM MAINLDLKRG GNFRFQKTAA YGHFGRDDPD FTWEVVKPLK PKA

Best Arabidopsis Sequence Match ( AT2G36880.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTA AKVDYEKIVR STCREIGFIS ADVGLDADKC NVLVNIEQQS
101: PDIAQGVHGH LTKKPEDIGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNKT CPWLRPDGKT QVTVEYKNDG GAMIPIRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP AKYLDDNTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVAAGLAR
301: RCIVQVSYAI GVPEPLSVFV DTYKTGTIPD KDILVLIKEA FDFRPGMMAI NLDLKRGGNF RFQKTAAYGH FGRDDPDFTW EVVKPLKPKA

Arabidopsis Description

METK3S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VXF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.