CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001661.1-P	Field mustard	cytosol	98.73	98.73
CDY63017	Canola	cytosol	98.47	98.47
AT3G17390.1	Thale cress	cytosol	97.2	97.2
CDY48693	Canola	cytosol	97.2	97.2
CDY72092	Canola	cytosol	85.5	92.05
CDY22010	Canola	cytosol	85.5	92.05
CDX74394	Canola	cytosol	85.24	91.78
CDX80079	Canola	cytosol	91.09	91.56
GSMUA_Achr3P12780_001	Banana	cytosol	91.35	91.12
CDY37784	Canola	cytosol	90.59	91.05
CDY46742	Canola	cytosol	86.77	90.93
CDX75007	Canola	cytosol	86.26	90.88
CDY33203	Canola	cytosol	86.26	90.88
EES17665	Sorghum	cytosol	91.09	90.4
Os05t0135700-01	Rice	cytosol	91.09	90.4
CDX79695	Canola	cytosol	86.26	90.4
HORVU6Hr1G034650.1	Barley	plasma membrane	90.84	90.15
GSMUA_Achr1P15960_001	Banana	cytosol	90.33	90.1
GSMUA_Achr8P06200_001	Banana	cytosol	89.82	89.82
TraesCS6A01G169300.1	Wheat	cytosol	90.33	89.65
TraesCS6B01G197300.1	Wheat	cytosol	90.33	89.65
TraesCS6D01G159100.1	Wheat	plastid	90.33	89.65
EES02825	Sorghum	cytosol	90.08	89.39
Os01t0293000-01	Rice	cytosol	90.08	89.39
GSMUA_Achr1P18400_001	Banana	cytosol	32.57	87.07
CDX91837	Canola	cytosol	78.12	84.34
CDX75914	Canola	cytosol, mitochondrion	100.0	83.97

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	GO:A0A078CZV2	InterPro:ADOMET_SYNTHASE_CS	EnsemblPlants:CDX82370
ProteinID:CDX82370	ProteinID:CDX82370.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478
GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00137491001	HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772
PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF35
MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase
InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniPathway:UPA00315	UniParc:UPI0004EF4835	SEG:seg

Description

BnaA03g34510D

Coordinates

chrLK031828:+:877919..879606

Molecular Weight (calculated)

42833.0 Da

IEP (calculated)

5.607

GRAVY (calculated)

-0.273

Length

393 amino acids

Sequence
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEKIVR KTCREIGFIS DDVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA KLTEVRKNGT CAWLRPDGKT QVTVEYLNEN GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RCIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Best Arabidopsis Sequence Match ( AT3G17390.1 )
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEQIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTIEYINES GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RVIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Arabidopsis Description

METK4S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.