CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G034650.1	Barley	plasma membrane	95.96	95.96
TraesCS6D01G159100.1	Wheat	plastid	95.71	95.71
TraesCS6B01G197300.1	Wheat	cytosol	95.71	95.71
TraesCS6A01G169300.1	Wheat	cytosol	95.71	95.71
Os01t0293000-01	Rice	cytosol	95.45	95.45
EES17665	Sorghum	cytosol	94.19	94.19
GSMUA_Achr8P06200_001	Banana	cytosol	92.17	92.88
KRH02439	Soybean	nucleus	91.92	92.86
GSMUA_Achr3P12780_001	Banana	cytosol	92.17	92.64
KRH50640	Soybean	endoplasmic reticulum	91.67	92.6
KRH02438	Soybean	endoplasmic reticulum, nucleus	91.67	92.6
GSMUA_Achr1P15960_001	Banana	cytosol	91.92	92.39
KRH12731	Soybean	endoplasmic reticulum	91.92	92.15
PGSC0003DMT400047146	Potato	cytosol	91.41	92.11
KRG96585	Soybean	cytosol, endoplasmic reticulum, nucleus	91.41	91.88
KRH68318	Soybean	endoplasmic reticulum	91.16	91.62
PGSC0003DMT400011943	Potato	cytosol	90.91	91.6
AT1G02500.1	Thale cress	cytosol	90.66	91.35
KXG32419	Sorghum	cytosol	90.66	91.12
CDX80079	Canola	cytosol	89.65	90.79
Bra041036.1-P	Field mustard	cytosol	89.65	90.79
CDY22010	Canola	cytosol	83.33	90.41
CDY72092	Canola	cytosol	83.33	90.41
CDY37784	Canola	cytosol	89.14	90.28
VIT_14s0060g00480.t01	Wine grape	cytosol	90.91	90.23
Bra036311.1-P	Field mustard	cytosol	83.08	90.14
CDX74394	Canola	cytosol	83.08	90.14
CDX82370	Canola	cytosol	89.39	90.08
Bra000914.1-P	Field mustard	cytosol	89.39	90.08
AT4G01850.1	Thale cress	cytosol	89.39	90.08
Bra021241.1-P	Field mustard	cytosol	89.14	89.82
CDY63017	Canola	cytosol	89.14	89.82
KRH33763	Soybean	endoplasmic reticulum	88.13	89.72
Bra001661.1-P	Field mustard	cytosol	88.64	89.31
AT3G17390.1	Thale cress	cytosol	88.64	89.31
CDY48693	Canola	cytosol	87.88	88.55
PGSC0003DMT400087679	Potato	cytosol	86.87	88.21
PGSC0003DMT400072701	Potato	cytosol	86.62	87.95
VIT_06s0061g00500.t01	Wine grape	cytosol	86.62	87.72
VIT_05s0020g00670.t01	Wine grape	cytosol	93.18	87.65
VIT_07s0005g02230.t01	Wine grape	cytosol	92.17	87.53
KRH67734	Soybean	endoplasmic reticulum	86.11	87.44
KRH19887	Soybean	endoplasmic reticulum	85.86	87.18
KRH32501	Soybean	cytosol	85.86	87.18
GSMUA_Achr1P18400_001	Banana	cytosol	32.32	87.07
AT2G36880.1	Thale cress	cytosol	85.61	86.92
Bra023084.1-P	Field mustard	cytosol	85.35	86.67
Bra017219.1-P	Field mustard	cytosol	85.1	86.41
CDX79695	Canola	cytosol	81.82	86.4
CDY46742	Canola	cytosol	81.82	86.4
CDX75007	Canola	cytosol	81.31	86.33
CDY33203	Canola	cytosol	81.31	86.33
Bra005236.1-P	Field mustard	cytosol	80.81	85.79
CDX91837	Canola	cytosol	76.26	82.97
KRH69160	Soybean	cytosol	40.66	77.03
CDX75914	Canola	cytosol, mitochondrion	89.39	75.64
Solyc04g049200.1.1	Tomato	cytosol	18.18	75.0
KRG96026	Soybean	cytosol	11.87	70.15
VIT_08s0007g05000.t01	Wine grape	cytosol	78.03	69.44
VIT_03s0017g00080.t01	Wine grape	cytosol	9.6	51.35

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	EntrezGene:8060304	InterPro:ADOMET_SYNTHASE_CS	UniProt:C5XI18
EnsemblPlants:EES02825	ProteinID:EES02825	ProteinID:EES02825.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	HAMAP:MF_00086	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF16	MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central
InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	EnsemblPlantsGene:SORBI_3003G140000	SUPFAM:SSF55973	unigene:Sbi.20807	TIGRFAMs:TIGR01034
UniParc:UPI0001A84FF5	RefSeq:XP_002457705.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:13615713..13618680

Molecular Weight (calculated)

43259.4 Da

IEP (calculated)

5.283

GRAVY (calculated)

-0.284

Length

396 amino acids

Sequence
(BLAST)

001: MAELDTFLFT SESVNEGHPD KLCDQISDAV LDACLAEDPD SKVACETCTK TNMVMVFGEI TTKANVDYEK IVRDTCRGIG FVSNDVGLDA DHCKVLVNIE
101: QQSPDIAQGV HGHFTKRPEE IGAGDQGHMF GYATDETPEM MPLSHVLATK LGARLTEVRK NGTCPWLRPD GKTQVTVEYH NDNGAMVPIR VHTVLISTQH
201: DETVTNDEIA ADLKEHVIKP VIPEQYLDEK TIFHLNPSGR FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYIAR QAAKSIVASG
301: LARRCIVQVS YAIGVPEPLS VFVDTYGTGK IPDKEILKIV LENFDLRPGM IIIDLDLKRG GNGRYLKTAA YGHFGRDDPD FTWELVKPLK WENPSA

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.