Factsheet for VIT_07s0005g02230.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P12780_001	Banana	cytosol	88.25	93.4
GSMUA_Achr1P15960_001	Banana	cytosol	87.77	92.89
KRG96585	Soybean	cytosol, endoplasmic reticulum, nucleus	87.77	92.89
VIT_14s0060g00480.t01	Wine grape	cytosol	88.73	92.73
KRH68318	Soybean	endoplasmic reticulum	87.53	92.64
EES17665	Sorghum	cytosol	87.53	92.17
Os05t0135700-01	Rice	cytosol	87.53	92.17
EES02825	Sorghum	cytosol	87.53	92.17
GSMUA_Achr8P06200_001	Banana	cytosol	86.57	91.86
Os01t0293000-01	Rice	cytosol	87.05	91.67
HORVU6Hr1G034650.1	Barley	plasma membrane	87.05	91.67
TraesCS6A01G169300.1	Wheat	cytosol	86.81	91.41
TraesCS6B01G197300.1	Wheat	cytosol	86.81	91.41
TraesCS6D01G159100.1	Wheat	plastid	86.81	91.41
VIT_05s0020g00670.t01	Wine grape	cytosol	90.89	90.02
VIT_06s0061g00500.t01	Wine grape	cytosol	83.45	89.0
GSMUA_Achr1P18400_001	Banana	cytosol	31.18	88.44
KRH69160	Soybean	cytosol	40.05	79.9
VIT_08s0007g05000.t01	Wine grape	cytosol	75.78	71.01
Zm00001d008175_P001	Maize	cytosol	11.51	57.14
VIT_03s0017g00080.t01	Wine grape	cytosol	9.11	51.35

Protein Annotations

KEGG:00270+2.5.1.6	EntrezGene:100243560	wikigene:100243560	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS
ProteinID:CCB60057	ProteinID:CCB60057.1	UniProt:F6HZE2	EMBL:FN596502	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EntrezGene:METK5
wikigene:METK5	HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497
ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF16	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N
InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGR:TC52183	TIGRFAMs:TIGR01034
UniParc:UPI000210A54E	ArrayExpress:VIT_07s0005g02230	EnsemblPlantsGene:VIT_07s0005g02230	EnsemblPlants:VIT_07s0005g02230.t01	unigene:Vvi.6655	RefSeq:XP_002280106
RefSeq:XP_002280106.1	SEG:seg	:	:	:	:

Description

S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:F6HZE2]

Coordinates

chr7:+:4612426..4615490

Molecular Weight (calculated)

45958.9 Da

IEP (calculated)

6.060

GRAVY (calculated)

-0.258

Length

417 amino acids

Sequence
(BLAST)

001: MCFCFQKRSR SCFLLCDRLD LVVLERMETF LFTSESVNEG HPDKLCDQIS DAVLDACLAQ DPDSKVACET CTKTNMVMVF GEITTKADID YEKIVRDTCR
101: TIGFVSDDVG LDADNCKVLV NIEQQSPDIA QGVHGHLTKR PEEIGAGDQG HMFGYATDET PELMPLSHVL ATKLGARLTE VRKNGTCSWL RPDGKTQVTV
201: EYHNENGAMV PLRVHTVLIS TQHDETVTND EIAADLKEHV IKPVIPEKYL DEKTIFHLNP SGRFVIGGPH GDAGLTGRKI IIDTYGGWGA HGGGAFSGKD
301: PTKVDRSGAY IVRQAAKSIV ANGLARRCIV QVSYAIGVPE PLSVFVDSYG TGKIPDKEIL KIVKENFDFR PGMIAINLDL KRGGNGRFLK TAAYGHFGRD
401: DPDFTWEVVK PLKWEKA

Best Arabidopsis Sequence Match ( AT4G01850.1 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATIDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM2S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178V3V9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.