Factsheet for VIT_03s0017g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P06200_001	Banana	cytosol	52.7	9.92
GSMUA_Achr1P15960_001	Banana	cytosol	52.7	9.9
HORVU6Hr1G034650.1	Barley	plasma membrane	52.7	9.85
VIT_14s0060g00480.t01	Wine grape	cytosol	52.7	9.77
VIT_06s0061g00500.t01	Wine grape	cytosol	51.35	9.72
GSMUA_Achr3P12780_001	Banana	cytosol	51.35	9.64
EES17665	Sorghum	cytosol	51.35	9.6
TraesCS6D01G159100.1	Wheat	plastid	51.35	9.6
TraesCS6B01G197300.1	Wheat	cytosol	51.35	9.6
TraesCS6A01G169300.1	Wheat	cytosol	51.35	9.6
Os05t0135700-01	Rice	cytosol	51.35	9.6
EES02825	Sorghum	cytosol	51.35	9.6
Os01t0293000-01	Rice	cytosol	50.0	9.34
VIT_05s0020g00670.t01	Wine grape	cytosol	52.7	9.26
VIT_07s0005g02230.t01	Wine grape	cytosol	51.35	9.11
VIT_08s0007g05000.t01	Wine grape	cytosol	51.35	8.54
Zm00001d008175_P001	Maize	cytosol	6.76	5.95
GSMUA_Achr1P18400_001	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:35.2	ProteinID:CCB57966	ProteinID:CCB57966.1	UniProt:F6HTF6
EMBL:FN596248	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004478	GO:GO:0005488
GO:GO:0005524	GO:GO:0006556	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	PFAM:PF02772	PANTHER:PTHR11964	PANTHER:PTHR11964:SF16	PANTHER:PTHR11964:SF33	InterPro:S-AdoMet_synt_central
InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	UniParc:UPI00021085D5	ArrayExpress:VIT_03s0017g00080	EnsemblPlantsGene:VIT_03s0017g00080
EnsemblPlants:VIT_03s0017g00080.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:14133921..14134230

Molecular Weight (calculated)

8404.9 Da

IEP (calculated)

4.993

GRAVY (calculated)

-0.372

Length

74 amino acids

Sequence
(BLAST)

1: MYWIWKARNE FNDEATRHAP DVLDCYKEIG VGDRSHMFGC ATGETPELIS LSHVLATKLG VCPSEVYKND TCPW

Best Arabidopsis Sequence Match ( AT3G17390.1 )
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEQIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTIEYINES GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RVIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Arabidopsis Description

METK4S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.