CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024754_P001	Maize	plasma membrane	97.73	97.48
Os05t0135700-01	Rice	cytosol	97.47	97.47
EES02825	Sorghum	cytosol	94.19	94.19
KRH12731	Soybean	endoplasmic reticulum	93.43	93.67
GSMUA_Achr3P12780_001	Banana	cytosol	92.68	93.15
KXG32419	Sorghum	cytosol	92.42	92.89
GSMUA_Achr8P06200_001	Banana	cytosol	91.67	92.37
CDX80079	Canola	cytosol	90.91	92.07
Bra041036.1-P	Field mustard	cytosol	90.91	92.07
GSMUA_Achr1P15960_001	Banana	cytosol	91.41	91.88
AT1G02500.1	Thale cress	cytosol	91.16	91.86
PGSC0003DMT400011943	Potato	cytosol	91.16	91.86
KRH02439	Soybean	nucleus	90.91	91.84
KRG96585	Soybean	cytosol, endoplasmic reticulum, nucleus	91.16	91.62
Bra021241.1-P	Field mustard	cytosol	90.91	91.6
CDY63017	Canola	cytosol	90.91	91.6
CDY37784	Canola	cytosol	90.4	91.56
KRH68318	Soybean	endoplasmic reticulum	90.91	91.37
PGSC0003DMT400047146	Potato	cytosol	90.66	91.35
KRH02438	Soybean	endoplasmic reticulum, nucleus	90.4	91.33
CDX82370	Canola	cytosol	90.4	91.09
KRH50640	Soybean	endoplasmic reticulum	90.15	91.07
CDY22010	Canola	cytosol	83.84	90.96
CDY72092	Canola	cytosol	83.84	90.96
CDX74394	Canola	cytosol	83.59	90.68
Bra036311.1-P	Field mustard	cytosol	83.59	90.68
AT3G17390.1	Thale cress	cytosol	89.9	90.59
Bra000914.1-P	Field mustard	cytosol	89.9	90.59
Bra001661.1-P	Field mustard	cytosol	89.65	90.33
CDY48693	Canola	cytosol	89.65	90.33
AT4G01850.1	Thale cress	cytosol	89.39	90.08
VIT_14s0060g00480.t01	Wine grape	cytosol	90.66	89.97
KRH33763	Soybean	endoplasmic reticulum	87.88	89.46
PGSC0003DMT400087679	Potato	cytosol	87.63	88.97
CDY46742	Canola	cytosol	84.09	88.8
CDX79695	Canola	cytosol	84.09	88.8
VIT_06s0061g00500.t01	Wine grape	cytosol	87.63	88.75
CDY33203	Canola	cytosol	83.59	88.74
CDX75007	Canola	cytosol	83.59	88.74
PGSC0003DMT400072701	Potato	cytosol	87.37	88.72
Bra023084.1-P	Field mustard	cytosol	87.37	88.72
AT2G36880.1	Thale cress	cytosol	87.12	88.46
Bra017219.1-P	Field mustard	cytosol	87.12	88.46
GSMUA_Achr1P18400_001	Banana	cytosol	32.83	88.44
Bra005236.1-P	Field mustard	cytosol	83.08	88.2
KRH32501	Soybean	cytosol	86.36	87.69
KRH19887	Soybean	endoplasmic reticulum	86.36	87.69
VIT_07s0005g02230.t01	Wine grape	cytosol	92.17	87.53
VIT_05s0020g00670.t01	Wine grape	cytosol	92.42	86.94
KRH67734	Soybean	endoplasmic reticulum	85.1	86.41
CDX91837	Canola	cytosol	76.52	83.24
Zm00001d010920_P001	Maize	plasma membrane	98.23	82.59
KRH69160	Soybean	cytosol	41.41	78.47
CDX75914	Canola	cytosol, mitochondrion	90.4	76.5
Solyc04g049200.1.1	Tomato	cytosol	17.42	71.88
KRG96026	Soybean	cytosol	12.12	71.64
VIT_08s0007g05000.t01	Wine grape	cytosol	79.04	70.34
VIT_03s0017g00080.t01	Wine grape	cytosol	9.6	51.35

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	EntrezGene:8071284	InterPro:ADOMET_SYNTHASE_CS	UniProt:C5YZJ4
EnsemblPlants:EES17665	ProteinID:EES17665	ProteinID:EES17665.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	HAMAP:MF_00086	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF34	MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central
InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	EnsemblPlantsGene:SORBI_3009G033600	SUPFAM:SSF55973	unigene:Sbi.1289	TIGRFAMs:TIGR01034
UniParc:UPI0001A88E10	RefSeq:XP_002439235.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:3045194..3048685

Molecular Weight (calculated)

42978.1 Da

IEP (calculated)

5.749

GRAVY (calculated)

-0.260

Length

396 amino acids

Sequence
(BLAST)

001: MAAVDTFLFT SESVNEGHPD KLCDQVSDAV LDACLAEDPD SKVACETCTK TNMVMVFGEI TTKANVDYEK IVRETCRNIG FVSADVGLDA DHCKVLVNIE
101: QQSPDIAQGV HGHFTKRPEE IGAGDQGHMF GYATDETPEL MPLSHVLATK LGAKLTEVRK NGTCAWLRPD GKTQVTVEYR NEGGAMVPIR VHTVLISTQH
201: DETVTNDEIA ADLKEHVIKP VIPEQYLDEK TIFHLNPSGR FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYIAR QAAKSIVANG
301: LARRAIVQVS YAIGVPEPLS VFVDTYGTGT IPDKEILKIV KENFDFRPGM IIINLDLKKG GNGRYLKTAA YGHFGRDDPD FTWEVVKPLK AEKPSA

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.