CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041036.1-P	Field mustard	cytosol	99.49	99.49
CDX80079	Canola	cytosol	99.49	99.49
CDY72092	Canola	cytosol	85.42	91.51
CDY22010	Canola	cytosol	85.42	91.51
CDX74394	Canola	cytosol	85.17	91.23
CDY63017	Canola	cytosol	91.05	90.59
CDX82370	Canola	cytosol	91.05	90.59
EES17665	Sorghum	cytosol	91.56	90.4
GSMUA_Achr3P12780_001	Banana	cytosol	91.05	90.36
AT3G17390.1	Thale cress	cytosol	90.79	90.33
Os05t0135700-01	Rice	cytosol	91.3	90.15
GSMUA_Achr8P06200_001	Banana	cytosol	90.28	89.82
GSMUA_Achr1P15960_001	Banana	cytosol	90.03	89.34
CDY48693	Canola	cytosol	89.77	89.31
Os01t0293000-01	Rice	cytosol	90.28	89.14
EES02825	Sorghum	cytosol	90.28	89.14
CDX79695	Canola	cytosol	85.42	89.07
TraesCS6D01G159100.1	Wheat	plastid	90.03	88.89
TraesCS6B01G197300.1	Wheat	cytosol	90.03	88.89
TraesCS6A01G169300.1	Wheat	cytosol	90.03	88.89
HORVU6Hr1G034650.1	Barley	plasma membrane	89.77	88.64
CDY46742	Canola	cytosol	84.91	88.53
CDX75007	Canola	cytosol	84.4	88.47
CDY33203	Canola	cytosol	84.4	88.47
GSMUA_Achr1P18400_001	Banana	cytosol	31.97	85.03
CDX91837	Canola	cytosol	78.52	84.34
CDX75914	Canola	cytosol, mitochondrion	91.05	76.07

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	GO:A0A078HKE6	UniProt:A0A078HKE6	InterPro:ADOMET_SYNTHASE_CS
EnsemblPlants:CDY37784	ProteinID:CDY37784	ProteinID:CDY37784.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00064719001
HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376
ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF21	MetaCyc:PWY-5041	MetaCyc:PWY-5912	InterPro:S-AdoMet_synt_C
InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034
UniPathway:UPA00315	UniParc:UPI0004EDE08A	SEG:seg	:	:	:

Description

BnaC04g00410DS-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078HKE6]

Coordinates

chrLK032408:-:67042..69092

Molecular Weight (calculated)

42710.8 Da

IEP (calculated)

5.944

GRAVY (calculated)

-0.299

Length

391 amino acids

Sequence
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQVSDAVLDA CLEQDPESKV ACETCTKTNM VMVFGEITTK AKVDYEKIVR DTCRAIGFVS ADVGLDADTC KVLVNIEEQS
101: PDIAQGVHGH FTKRPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CPWVRPDGKT QVTVEYYNEN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KQHVIKPVIP AKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPSKVDR SGAYIARQAA KSIVASDLAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGKIPD KEILKIVKEN FDFRPGMMTI NLDLTRGGNG RFLKTAAYGH FGREDPDFTW EVVKPLKAEK A

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.