Factsheet for TraesCS6A01G169300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G159100.1	Wheat	plastid	100.0	100.0
TraesCS6B01G197300.1	Wheat	cytosol	100.0	100.0
HORVU6Hr1G034650.1	Barley	plasma membrane	98.99	98.99
EES02825	Sorghum	cytosol	95.71	95.71
Os01t0293000-01	Rice	cytosol	94.7	94.7
KRH50640	Soybean	endoplasmic reticulum	91.92	92.86
KRH02439	Soybean	nucleus	91.92	92.86
GSMUA_Achr8P06200_001	Banana	cytosol	91.67	92.37
KRH02438	Soybean	endoplasmic reticulum, nucleus	91.41	92.35
KRH68318	Soybean	endoplasmic reticulum	91.41	91.88
GSMUA_Achr3P12780_001	Banana	cytosol	91.41	91.88
KRH12731	Soybean	endoplasmic reticulum	91.41	91.65
KRG96585	Soybean	cytosol, endoplasmic reticulum, nucleus	91.16	91.62
PGSC0003DMT400047146	Potato	cytosol	90.91	91.6
GSMUA_Achr1P15960_001	Banana	cytosol	90.66	91.12
PGSC0003DMT400011943	Potato	cytosol	90.4	91.09
AT1G02500.1	Thale cress	cytosol	90.15	90.84
Bra021241.1-P	Field mustard	cytosol	89.9	90.59
CDY63017	Canola	cytosol	89.9	90.59
TraesCS3A01G195300.1	Wheat	cytosol	89.9	90.36
CDX82370	Canola	cytosol	89.65	90.33
CDY22010	Canola	cytosol	83.08	90.14
CDY72092	Canola	cytosol	83.08	90.14
CDX80079	Canola	cytosol	88.89	90.03
Bra041036.1-P	Field mustard	cytosol	88.89	90.03
CDY37784	Canola	cytosol	88.89	90.03
Bra036311.1-P	Field mustard	cytosol	82.83	89.86
CDX74394	Canola	cytosol	82.83	89.86
Bra001661.1-P	Field mustard	cytosol	88.89	89.57
Bra000914.1-P	Field mustard	cytosol	88.89	89.57
AT4G01850.1	Thale cress	cytosol	88.89	89.57
AT3G17390.1	Thale cress	cytosol	88.89	89.57
CDY48693	Canola	cytosol	88.64	89.31
VIT_14s0060g00480.t01	Wine grape	cytosol	89.65	88.97
KRH33763	Soybean	endoplasmic reticulum	87.37	88.95
TraesCS6A01G248000.1	Wheat	cytosol	88.38	88.83
PGSC0003DMT400072701	Potato	cytosol	87.12	88.46
PGSC0003DMT400087679	Potato	cytosol	86.87	88.21
GSMUA_Achr1P18400_001	Banana	cytosol	32.58	87.76
CDX79695	Canola	cytosol	82.58	87.2
AT2G36880.1	Thale cress	cytosol	85.86	87.18
VIT_05s0020g00670.t01	Wine grape	cytosol	92.42	86.94
Bra023084.1-P	Field mustard	cytosol	85.61	86.92
KRH19887	Soybean	endoplasmic reticulum	85.61	86.92
VIT_07s0005g02230.t01	Wine grape	cytosol	91.41	86.81
CDY46742	Canola	cytosol	82.07	86.67
Bra017219.1-P	Field mustard	cytosol	85.35	86.67
KRH67734	Soybean	endoplasmic reticulum	85.35	86.67
CDX75007	Canola	cytosol	81.57	86.6
CDY33203	Canola	cytosol	81.57	86.6
VIT_06s0061g00500.t01	Wine grape	cytosol	85.35	86.44
KRH32501	Soybean	cytosol	85.1	86.41
Bra005236.1-P	Field mustard	cytosol	81.06	86.06
CDX91837	Canola	cytosol	76.26	82.97
TraesCS6A01G247900.2	Wheat	cytosol, mitochondrion	89.14	82.09
KRH69160	Soybean	cytosol	41.41	78.47
CDX75914	Canola	cytosol, mitochondrion	89.65	75.85
Solyc04g049200.1.1	Tomato	cytosol	17.93	73.96
VIT_08s0007g05000.t01	Wine grape	cytosol	77.02	68.54
KRG96026	Soybean	cytosol	11.36	67.16
VIT_03s0017g00080.t01	Wine grape	cytosol	9.6	51.35

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	HAMAP:MF_00086	PFAM:PF00438
PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964
PANTHER:PTHR11964:SF16	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam
SUPFAM:SSF55973	TIGRFAMs:TIGR01034	EnsemblPlantsGene:TraesCS6A01G169300	EnsemblPlants:TraesCS6A01G169300.1	SEG:seg	:

Description

No Description!

Coordinates

chr6A:+:177264856..177266216

Molecular Weight (calculated)

43254.4 Da

IEP (calculated)

5.573

GRAVY (calculated)

-0.279

Length

396 amino acids

Sequence
(BLAST)

001: MAEVETFLFT SESVNEGHPD KLCDQISDAV LDACLAEDPD SKVACETCTK TNMVMVFGEI TTKANVDYEK IVRDTCRGIG FVSNDVGLDA DHCKVLVNIE
101: QQSPDIAQGV HGHFTKRPEE IGAGDQGHMF GYATDETPEF MPLSHVLATK LGARLTEVRK NATCPWLRPD GKTQVTVEYH NDNGAMVPIR VHTVLISTQH
201: DETVTNDEIA ADLKEHVIKP VIPEQYLDEN TIFHLNPSGR FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYVAR QAAKSIVASG
301: IARRCIVQVS YAIGVPEPLS VFVDTYGTGK IPDKEILEIV KENFDFRPGM IIINLDLKRG GKGRYLKTAA YGHFGREGAD FTWEVVKPLK WEKPSA

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.