Factsheet for VIT_14s0060g00480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 2
plastid 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047146	Potato	cytosol	92.23	93.64
Solyc01g101060.2.1	Tomato	extracellular, nucleus, plastid	91.73	93.13
GSMUA_Achr3P12780_001	Banana	cytosol	91.48	92.64
GSMUA_Achr1P15960_001	Banana	cytosol	90.98	92.13
GSMUA_Achr8P06200_001	Banana	cytosol	90.23	91.6
KRH33763	Soybean	endoplasmic reticulum	88.97	91.26
EES02825	Sorghum	cytosol	90.23	90.91
EES17665	Sorghum	cytosol	89.97	90.66
Os05t0135700-01	Rice	cytosol	89.72	90.4
HORVU6Hr1G034650.1	Barley	plasma membrane	89.22	89.9
TraesCS6A01G169300.1	Wheat	cytosol	88.97	89.65
TraesCS6B01G197300.1	Wheat	cytosol	88.97	89.65
TraesCS6D01G159100.1	Wheat	plastid	88.97	89.65
Os01t0293000-01	Rice	cytosol	88.72	89.39
VIT_07s0005g02230.t01	Wine grape	cytosol	92.73	88.73
VIT_05s0020g00670.t01	Wine grape	cytosol	93.48	88.6
VIT_06s0061g00500.t01	Wine grape	cytosol	86.72	88.49
GSMUA_Achr1P18400_001	Banana	cytosol	31.58	85.71
VIT_08s0007g05000.t01	Wine grape	cytosol	79.2	71.01
Zm00001d008175_P001	Maize	cytosol	11.78	55.95
VIT_03s0017g00080.t01	Wine grape	cytosol	9.77	52.7

Protein Annotations

KEGG:00270+2.5.1.6	EntrezGene:100251171	wikigene:100251171	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS
ProteinID:CCB61954	ProteinID:CCB61954.1	UniProt:F6I4H0	EMBL:FN596746	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EntrezGene:METK4
wikigene:METK4	HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497
ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF16	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N
InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGR:TC51748	TIGR:TC51754
TIGRFAMs:TIGR01034	UniParc:UPI0002108BC1	ArrayExpress:VIT_14s0060g00480	EnsemblPlantsGene:VIT_14s0060g00480	EnsemblPlants:VIT_14s0060g00480.t01	unigene:Vvi.6941
unigene:Vvi.9340	RefSeq:XP_002280318	RefSeq:XP_002280318.2	SEG:seg	:	:

Description

S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:F6I4H0]

Coordinates

chr14:-:449722..452330

Molecular Weight (calculated)

43767.2 Da

IEP (calculated)

5.912

GRAVY (calculated)

-0.265

Length

399 amino acids

Sequence
(BLAST)

001: MKFLWKMDTF LFTSESVNEG HPDKLCDQIS DAVLDACLEQ DPDSKVACET CTKTNLVMIF GEITTKANLD YEKIVRDTCR AVGFVSEDVG LDADNCKVLV
101: NIEQQSPDIA QGVHGHLTKR PEEIGAGDQG HMFGYATDET PELMPLSHVL ATKLGARLTE VRKNGTCPWL RPDGKTQVTV EYFNDHGAMV PIRVHTVLIS
201: TQHDETVTND EIAADLKEHV IKPIVPEKFL DEKTIFHLNP SGRFVIGGPH GDAGLTGRKI IIDTYGGWGA HGGGAFSGKD PTKVDRSGAY IVRQAAKSIV
301: ASGLARRCIV QVSYAIGVPE PLSVFVDTYA TGKIPDKEIL KIVKESFDFR PGMIAINLDL KRGGNGRFLK TAAYGHFGRD DPDFTWEVVK PLKAEKAQE

Best Arabidopsis Sequence Match ( AT3G17390.1 )
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEQIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTIEYINES GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RVIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Arabidopsis Description

METK4S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.