Factsheet for VIT_06s0061g00500.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072701	Potato	cytosol	93.61	93.85
Solyc09g008280.1.1	Tomato	nucleus	93.35	93.59
Solyc10g083970.1.1	Tomato	nucleus, unclear	93.09	93.33
PGSC0003DMT400087679	Potato	cytosol	93.09	93.33
Bra017219.1-P	Field mustard	cytosol	91.56	91.79
Bra005236.1-P	Field mustard	cytosol	87.47	91.69
CDX75007	Canola	cytosol	87.47	91.69
CDY33203	Canola	cytosol	87.47	91.69
AT2G36880.1	Thale cress	cytosol	91.3	91.54
Bra023084.1-P	Field mustard	cytosol	91.05	91.28
CDX79695	Canola	cytosol	87.47	91.2
CDY46742	Canola	cytosol	87.47	91.2
EES17665	Sorghum	cytosol	88.75	87.63
GSMUA_Achr3P12780_001	Banana	cytosol	87.98	87.31
Os05t0135700-01	Rice	cytosol	87.98	86.87
VIT_14s0060g00480.t01	Wine grape	cytosol	88.49	86.72
EES02825	Sorghum	cytosol	87.72	86.62
GSMUA_Achr1P15960_001	Banana	cytosol	87.21	86.55
GSMUA_Achr8P06200_001	Banana	cytosol	86.7	86.26
Os01t0293000-01	Rice	cytosol	86.96	85.86
HORVU6Hr1G034650.1	Barley	plasma membrane	86.96	85.86
TraesCS6A01G169300.1	Wheat	cytosol	86.44	85.35
TraesCS6B01G197300.1	Wheat	cytosol	86.44	85.35
TraesCS6D01G159100.1	Wheat	plastid	86.44	85.35
VIT_07s0005g02230.t01	Wine grape	cytosol	89.0	83.45
VIT_05s0020g00670.t01	Wine grape	cytosol	89.26	82.9
GSMUA_Achr1P18400_001	Banana	cytosol	29.67	78.91
VIT_08s0007g05000.t01	Wine grape	cytosol	86.19	75.73
VIT_03s0017g00080.t01	Wine grape	cytosol	9.72	51.35

Protein Annotations

KEGG:00270+2.5.1.6	EntrezGene:100245243	wikigene:100245243	EntrezGene:100263678	wikigene:100263678	Gene3D:3.30.300.10
MapMan:7.3.1	UniProt:A7PQS0	InterPro:ADOMET_SYNTHASE_CS	EMBL:AM449314	ProteinID:CAN72082	ProteinID:CAN72082.1
ProteinID:CCB44230	ProteinID:CCB44230.1	EMBL:FN594957	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	EntrezGene:LOC100263678	wikigene:LOC100263678
EntrezGene:METK3	wikigene:METK3	HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773
PIRSF:PIRSF000497	ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF15	InterPro:S-AdoMet_synt_C
InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034
UniParc:UPI00015C9DD7	ArrayExpress:VIT_06s0061g00500	EnsemblPlantsGene:VIT_06s0061g00500	EnsemblPlants:VIT_06s0061g00500.t01	RefSeq:XP_002270100	RefSeq:XP_002270100.1
RefSeq:XP_002273336	RefSeq:XP_002273336.1	RefSeq:XP_003632745	RefSeq:XP_003632745.1	RefSeq:XP_010651779.1	SEG:seg

Description

METK1S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:A7PQS0]

Coordinates

chr6:+:17979014..17980194

Molecular Weight (calculated)

42740.0 Da

IEP (calculated)

6.644

GRAVY (calculated)

-0.329

Length

391 amino acids

Sequence
(BLAST)

001: MDTFLFTSES VNEGHPDKLC DQVSDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK AKVNYEKIVR DTCRGIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEIGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTVEYRNEG GAMVPIRVHT VLVSTQHDET
201: VTNEQIAKDL KEHVIKPVIP PQYLDDQTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVASGLAR
301: RCIVQVSYAI GVPEPLSVFV DTYKTGKIPD KDILALIKKN FDFRPGMISI NLDLKRGGNF RFQKTAAYGH FGRDDPDFSW ETVKQLKPEK A

Best Arabidopsis Sequence Match ( AT2G36880.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTA AKVDYEKIVR STCREIGFIS ADVGLDADKC NVLVNIEQQS
101: PDIAQGVHGH LTKKPEDIGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNKT CPWLRPDGKT QVTVEYKNDG GAMIPIRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP AKYLDDNTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVAAGLAR
301: RCIVQVSYAI GVPEPLSVFV DTYKTGTIPD KDILVLIKEA FDFRPGMMAI NLDLKRGGNF RFQKTAAYGH FGRDDPDFTW EVVKPLKPKA

Arabidopsis Description

METK3S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VXF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.