Factsheet for Os01t0293000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02825	Sorghum	cytosol	95.45	95.45
TraesCS6D01G159100.1	Wheat	plastid	94.7	94.7
TraesCS6B01G197300.1	Wheat	cytosol	94.7	94.7
TraesCS6A01G169300.1	Wheat	cytosol	94.7	94.7
HORVU6Hr1G034650.1	Barley	plasma membrane	94.44	94.44
Os05t0135700-01	Rice	cytosol	93.69	93.69
PGSC0003DMT400011943	Potato	cytosol	91.92	92.62
KRH02438	Soybean	endoplasmic reticulum, nucleus	91.41	92.35
KRH02439	Soybean	nucleus	91.16	92.09
GSMUA_Achr3P12780_001	Banana	cytosol	91.41	91.88
Os01t0323600-01	Rice	plasma membrane	91.41	91.88
KRH50640	Soybean	endoplasmic reticulum	90.91	91.84
KRG96585	Soybean	cytosol, endoplasmic reticulum, nucleus	91.16	91.62
GSMUA_Achr8P06200_001	Banana	cytosol	90.91	91.6
KRH12731	Soybean	endoplasmic reticulum	91.16	91.39
KRH68318	Soybean	endoplasmic reticulum	90.91	91.37
PGSC0003DMT400047146	Potato	cytosol	90.66	91.35
GSMUA_Achr1P15960_001	Banana	cytosol	90.66	91.12
AT1G02500.1	Thale cress	cytosol	90.15	90.84
CDX80079	Canola	cytosol	89.14	90.28
Bra041036.1-P	Field mustard	cytosol	89.14	90.28
CDY37784	Canola	cytosol	89.14	90.28
CDX82370	Canola	cytosol	89.39	90.08
CDY72092	Canola	cytosol	82.83	89.86
CDY22010	Canola	cytosol	82.83	89.86
CDY63017	Canola	cytosol	89.14	89.82
Bra021241.1-P	Field mustard	cytosol	89.14	89.82
KRH33763	Soybean	endoplasmic reticulum	88.13	89.72
Os01t0207300-00	Rice	cytosol	37.12	89.63
Os07t0477250-00	Rice	cytosol	37.12	89.63
CDX74394	Canola	cytosol	82.58	89.59
Bra036311.1-P	Field mustard	cytosol	82.58	89.59
Bra000914.1-P	Field mustard	cytosol	88.89	89.57
AT4G01850.1	Thale cress	cytosol	88.89	89.57
Bra001661.1-P	Field mustard	cytosol	88.64	89.31
AT3G17390.1	Thale cress	cytosol	88.13	88.8
VIT_14s0060g00480.t01	Wine grape	cytosol	89.39	88.72
CDY48693	Canola	cytosol	87.88	88.55
PGSC0003DMT400087679	Potato	cytosol	86.11	87.44
PGSC0003DMT400072701	Potato	cytosol	85.86	87.18
VIT_07s0005g02230.t01	Wine grape	cytosol	91.67	87.05
VIT_06s0061g00500.t01	Wine grape	cytosol	85.86	86.96
VIT_05s0020g00670.t01	Wine grape	cytosol	92.42	86.94
CDX79695	Canola	cytosol	82.32	86.93
KRH32501	Soybean	cytosol	85.61	86.92
KRH19887	Soybean	endoplasmic reticulum	85.61	86.92
KRH67734	Soybean	endoplasmic reticulum	85.61	86.92
AT2G36880.1	Thale cress	cytosol	85.1	86.41
Bra017219.1-P	Field mustard	cytosol	85.1	86.41
CDY46742	Canola	cytosol	81.82	86.4
GSMUA_Achr1P18400_001	Banana	cytosol	32.07	86.39
CDX75007	Canola	cytosol	81.31	86.33
CDY33203	Canola	cytosol	81.31	86.33
Bra023084.1-P	Field mustard	cytosol	84.85	86.15
Bra005236.1-P	Field mustard	cytosol	80.81	85.79
CDX91837	Canola	cytosol	75.76	82.42
KRH69160	Soybean	cytosol	40.91	77.51
CDX75914	Canola	cytosol, mitochondrion	89.39	75.64
Solyc04g049200.1.1	Tomato	cytosol	17.93	73.96
KRG96026	Soybean	cytosol	11.87	70.15
VIT_08s0007g05000.t01	Wine grape	cytosol	77.02	68.54
VIT_03s0017g00080.t01	Wine grape	cytosol	9.34	50.0

Protein Annotations

KEGG:00270+2.5.1.6	Gene3D:3.30.300.10	EntrezGene:4325163	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	EMBL:AK241882
ProteinID:BAA96637.1	ProteinID:BAF04708.1	ProteinID:BAS71668.1	ProteinID:EAZ11533.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006556	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872	HAMAP:MF_00086
EnsemblPlantsGene:Os01g0293000	EnsemblPlants:Os01t0293000-01	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497
ScanProsite:PS00376	ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF16	UniProt:Q9LGU6	InterPro:S-AdoMet_synt_C
InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central	InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034
UniParc:UPI00000AA1EB	RefSeq:XP_015614349.1	RefSeq:XP_015614357.1	SEG:seg	:	:

Description

S-Adenosyl-l-methionine synthetase 3Similar to S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) (Fragment). (Os01t0293000-01)

Coordinates

chr1:-:10657543..10660137

Molecular Weight (calculated)

43312.4 Da

IEP (calculated)

5.080

GRAVY (calculated)

-0.274

Length

396 amino acids

Sequence
(BLAST)

001: MAEVDTFLFT SESVNEGHPD KLCDQISDAV LDACLAEDPE SKVACETCTK TNMVMVFGEI TTKANVDYEK IVRDTCRGIG FVSNDVGLDA EHCKVLVNIE
101: QQSPDIAQGV HGHFTKRPEE IGAGDQGHMF GYATDETPEL MPLSHVLATK LGARLTEVRK NGACAWLRPD GKTQVTVEYQ NDNGAMVPLR VHTVLISTQH
201: DETVTNDEIA ADLKEHVIKP VIPEQYLDEK TIFHLNPSGR FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYIAR QAAKSIVANG
301: LARRCIVQVS YAIGVPEPLS VFVDTYGTGK IPDREILRIV TENFDFRPGM IIINLDLMRG GNGRYLKTAA YGHFGREDPD FTWEVVKPLK WEEPSA

Best Arabidopsis Sequence Match ( AT1G02500.2 )
(BLAST)

001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATVDYEKIVR DTCRAIGFVS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKCPEEIGA GDQGHMFGYA TDETPELMPL SHVLATKLGA RLTEVRKNGT CAWLRPDGKT QVTVEYYNDK GAMVPIRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYETGLIPD KEILKIVKES FDFRPGMMTI NLDLKRGGNG RFLKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA

Arabidopsis Description

SAM1S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.