Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P18400_001 | Banana | cytosol | 55.21 | 36.05 |
| Solyc12g099000.1.1 | Tomato | nucleus | 76.04 | 18.58 |
| EES02825 | Sorghum | cytosol | 75.0 | 18.18 |
| Solyc01g101060.2.1 | Tomato | extracellular, nucleus, plastid | 73.96 | 18.07 |
| TraesCS6D01G159100.1 | Wheat | plastid | 73.96 | 17.93 |
| HORVU6Hr1G034650.1 | Barley | plasma membrane | 73.96 | 17.93 |
| Os01t0293000-01 | Rice | cytosol | 73.96 | 17.93 |
| TraesCS6B01G197300.1 | Wheat | cytosol | 73.96 | 17.93 |
| TraesCS6A01G169300.1 | Wheat | cytosol | 73.96 | 17.93 |
| GSMUA_Achr8P06200_001 | Banana | cytosol | 72.92 | 17.81 |
| Solyc09g008280.1.1 | Tomato | nucleus | 71.88 | 17.69 |
| GSMUA_Achr1P15960_001 | Banana | cytosol | 71.88 | 17.51 |
| EES17665 | Sorghum | cytosol | 71.88 | 17.42 |
| Os05t0135700-01 | Rice | cytosol | 71.88 | 17.42 |
| Zm00001d024754_P001 | Maize | plasma membrane | 71.88 | 17.38 |
| GSMUA_Achr3P12780_001 | Banana | cytosol | 70.83 | 17.26 |
| Solyc10g083970.1.1 | Tomato | nucleus, unclear | 69.79 | 17.18 |
| Zm00001d010920_P001 | Maize | plasma membrane | 71.88 | 14.65 |
Protein Annotations
| KEGG:00270+2.5.1.6 | Gene3D:3.30.300.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004478 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006556 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | UniProt:K4BRP8 | PFAM:PF02772 | PANTHER:PTHR11964 |
| PANTHER:PTHR11964:SF21 | InterPro:S-AdoMet_synt_central | InterPro:S-AdoMet_synthetase | InterPro:S-AdoMet_synthetase_sfam | SUPFAM:SSF55973 | EnsemblPlantsGene:Solyc04g049200.1 |
| EnsemblPlants:Solyc04g049200.1.1 | UniParc:UPI000276662B | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:40247321..40248493
Molecular Weight (calculated)
10831.9 Da
IEP (calculated)
5.968
GRAVY (calculated)
-0.408
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MTKTGILCNQ RINQDLTVEY HNDNGAMVPV CVHTVLISTQ HDEIVTNDEI TRDHKERVIK NVIPEKYLDE KTIFHLNPSG RFVISGPNGD AGLTNF
001: METFLFTSES VNEGHPDKLC DQISDAVLDA CLEQDPDSKV ACETCTKTNM VMVFGEITTK ATIDYEKIVR DTCRSIGFIS DDVGLDADKC KVLVNIEQQS
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA
101: PDIAQGVHGH FTKRPEDIGA GDQGHMFGYA TDETPELMPL SHVLATKIGA RLTEVRKNGT CRWLRPDGKT QVTVEYYNDN GAMVPVRVHT VLISTQHDET
201: VTNDEIARDL KEHVIKPIIP EKYLDDKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSVVANGMAR
301: RALVQVSYAI GVPEPLSVFV DTYGTGLIPD KEILKIVKET FDFRPGMMTI NLDLKRGGNG RFQKTAAYGH FGRDDPDFTW EVVKPLKWDK PQA
Arabidopsis Description
SAM2S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178V3V9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.