Factsheet for Zm00001d024754_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17665	Sorghum	cytosol	97.48	97.73
Os05t0135700-01	Rice	cytosol	96.98	97.22
GSMUA_Achr3P12780_001	Banana	cytosol	92.19	92.89
GSMUA_Achr8P06200_001	Banana	cytosol	91.94	92.88
Zm00001d040697_P001	Maize	cytosol, extracellular, plasma membrane	91.18	91.88
GSMUA_Achr1P15960_001	Banana	cytosol	90.93	91.62
GSMUA_Achr1P18400_001	Banana	cytosol	32.49	87.76
Zm00001d009146_P002	Maize	extracellular, mitochondrion, plasma membrane	91.18	84.78
Zm00001d010920_P001	Maize	plasma membrane	98.49	83.01
Solyc04g049200.1.1	Tomato	cytosol	17.38	71.88
Zm00001d008175_P001	Maize	cytosol	12.34	58.33

Protein Annotations

KEGG:00270+2.5.1.6	EntrezGene:100279822	Gene3D:3.30.300.10	MapMan:7.3.1	InterPro:ADOMET_SYNTHASE_CS	ProteinID:AQK41964.1
UniProt:B8A068	EMBL:BT054960	EMBL:BT054969	EMBL:BT086496	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004478	GO:GO:0005488	GO:GO:0005524	GO:GO:0006556	GO:GO:0006730
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0046872
HAMAP:MF_00086	PFAM:PF00438	PFAM:PF02772	PFAM:PF02773	PIRSF:PIRSF000497	ScanProsite:PS00376
ScanProsite:PS00377	PANTHER:PTHR11964	PANTHER:PTHR11964:SF34	InterPro:S-AdoMet_synt_C	InterPro:S-AdoMet_synt_N	InterPro:S-AdoMet_synt_central
InterPro:S-AdoMet_synthetase	InterPro:S-AdoMet_synthetase_sfam	SUPFAM:SSF55973	TIGRFAMs:TIGR01034	UniParc:UPI00019173C1	EnsemblPlantsGene:Zm00001d024754
EnsemblPlants:Zm00001d024754_P001	EnsemblPlants:Zm00001d024754_T001	SEG:seg	:	:	:

Description

S-adenosylmethionine synthase

Coordinates

chr10:+:86460332..86461525

Molecular Weight (calculated)

43075.2 Da

IEP (calculated)

5.749

GRAVY (calculated)

-0.272

Length

397 amino acids

Sequence
(BLAST)

001: MAGLDTFLFT SESVNEGHPD KLCDQVSDAV LDACLAEDPD SKVACETCTK TNMVMVFGEI TTKANVDYEK IVRETCRNIG FVSNDVGLDA DHCKVLVNIE
101: QQSPDIAQGV HGHFTKRPEE IGAGDQGHMF GYATDETPEL MPLSHVLATK LGARLTEVRK NGTCPWLRPD GKTQVTVEYR NEGGAMVPIR VHTVLISTQH
201: DETVTNDEIA ADLKEHVIKP VIPEQYLDEK TIFHLNPSGR FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYVAR QAAKSIVAAG
301: LARRAIVQVS YAIGVPEPLS VFVDTYGTGA IPDKEILKIV KENFDFRPGM IIINLDLKKG GNGRYLKTAA YGHFGRDDPD FTWEVVKPLK AEKPSSA

Best Arabidopsis Sequence Match ( AT3G17390.1 )
(BLAST)

001: MESFLFTSES VNEGHPDKLC DQISDAILDA CLEQDPESKV ACETCTKTNM VMVFGEITTK ANVDYEQIVR KTCREIGFVS ADVGLDADNC KVLVNIEQQS
101: PDIAQGVHGH LTKKPEEVGA GDQGHMFGYA TDETPELMPL THVLATKLGA KLTEVRKNGT CPWLRPDGKT QVTIEYINES GAMVPVRVHT VLISTQHDET
201: VTNDEIAADL KEHVIKPVIP EKYLDEKTIF HLNPSGRFVI GGPHGDAGLT GRKIIIDTYG GWGAHGGGAF SGKDPTKVDR SGAYIVRQAA KSIVASGLAR
301: RVIVQVSYAI GVPEPLSVFV DSYGTGKIPD KEILEIVKES FDFRPGMISI NLDLKRGGNG RFLKTAAYGH FGRDDADFTW EVVKPLKSNK VQA

Arabidopsis Description

METK4S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.